D. rerio Gene: cdk5rap1 - ENSDARG00000044925 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044925
Namecdk5rap1
DescriptionCDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:162738

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
6.25e3
  • 6.25e3
  • 1.50e4
79.07
  • 79.07
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
6.25e3
  • 6.25e3
  • 9.31e3
79.06
  • 79.06
  • 68.81
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.66e3
  • 6.66e3
77.71
  • 77.71
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.13e3
  • 7.13e3
76.12
  • 76.12
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.56e3
  • 7.56e3
74.70
  • 74.70
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.83e3
  • 7.83e3
73.77
  • 73.77
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.33e3
  • 8.33e3
72.11
  • 72.11
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.61e3
  • 8.61e3
71.19
  • 71.19
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.61e3
  • 8.61e3
71.17
  • 71.17
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.74e3
  • 8.74e3
70.73
  • 70.73
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
8.79e3
  • 8.79e3
  • 1.17e4
  • 1.19e4
  • 1.32e4
  • 1.38e4
70.56
  • 70.56
  • 60.73
  • 60.07
  • 55.75
  • 53.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.52e3
  • 9.52e3
68.13
  • 68.13
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.66e3
  • 9.66e3
67.64
  • 67.64
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.67e3
  • 9.67e3
67.63
  • 67.63
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.02e4
  • 1.02e4
65.83
  • 65.83
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.81
  • 64.81
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.40
  • 64.40
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.42
  • 62.42
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.34
  • 62.34
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
  • 1.42e4
61.09
  • 61.09
  • 52.58
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
  • 1.50e4
59.78
  • 59.78
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.24e4
  • 1.24e4
  • 1.54e4
58.64
  • 58.64
  • 48.31
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.25e4
  • 1.25e4
  • 1.40e4
58.27
  • 58.27
  • 53.02
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.29e4
  • 1.29e4
56.65
  • 56.65
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.30e4
  • 1.30e4
  • 1.70e4
56.33
  • 56.33
  • 43.04
AEIR
  • AEIR
  • AEIR
UBERON:0008897fin
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.86
  • 50.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCR385028, CT573268
EnsemblENSDARG00000044925 (cdk5rap1)
Uniprot/SPTREMBLF1QMW8, F1QMW8_DANRE
ZFINZDB-GENE-070424-90 (cdk5rap1)

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