D. rerio Gene: itgb3b - ENSDARG00000045070 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045070
Nameitgb3b
Descriptionintegrin beta 3b [Source:ZFIN;Acc:ZDB-GENE-071207-2]
OrganismDanio rerio (zebrafish)
Synonym(s)integrin beta 3.1, itgb3.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.90e3
  • 2.90e3
90.30
  • 90.30
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.56e3
  • 3.56e3
88.08
  • 88.08
AEIR
  • AEIR
UBERON:0001083myocardium of ventricle
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
  • 9.96e3
75.00
  • 75.00
  • 66.67
AEIR
  • AEIR
  • AEIR
UBERON:2005317pectoral fin fold
  • ZFS:0000034Hatching:Pec-fin
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.36e3
  • 8.36e3
  • 9.87e3
71.99
  • 71.99
  • 66.96
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.96e3
  • 9.96e3
  • 1.66e4
66.67
  • 66.67
  • 44.35
AEIR
  • AEIR
  • AEIR
UBERON:2001143tooth 4V
  • ZFS:0000035Larval:Protruding-mouth
9.96e3
  • 9.96e3
66.66
  • 66.66
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.79
  • 62.79
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.45
  • 57.45
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.41
  • 57.41
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.32e4
  • 1.32e4
  • 2.36e4
55.69
  • 55.69
  • 21.14
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.26
  • 55.26
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
  • 1.34e4
  • 1.36e4
54.99
  • 54.99
  • 54.99
  • 54.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003843dental epithelium
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0014907intersomitic vessel
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2000633caudal tuberculum
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.76
  • 46.76
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.50
  • 46.50
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.68e4
  • 1.68e4
43.62
  • 43.62
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.44
  • 43.44
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.76e4
  • 1.76e4
  • 1.78e4
  • 1.92e4
  • 2.06e4
  • 2.21e4
40.95
  • 40.95
  • 40.52
  • 35.67
  • 31.10
  • 26.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.77e4
  • 1.77e4
  • 1.91e4
40.60
  • 40.60
  • 36.18
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.45
  • 38.45
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.56
  • 37.56
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.61
  • 32.61
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

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