D. rerio Gene: APCS - ENSDARG00000045089 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045089
NameAPCS
Descriptionsi:ch211-270n8.1 [Source:ZFIN;Acc:ZDB-GENE-081107-34]
OrganismDanio rerio (zebrafish)
Synonym(s)mgc88159, ptx2, sap

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
278
  • 278
99.07
  • 99.07
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
660
  • 660
97.79
  • 97.79
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
832
  • 832
97.22
  • 97.22
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.41e3
  • 1.41e3
  • 1.56e4
95.29
  • 95.29
  • 47.70
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.67e3
  • 1.67e3
  • 2.37e3
94.40
  • 94.40
  • 92.07
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.76e3
  • 1.76e3
94.11
  • 94.11
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
3.45e3
  • 3.45e3
  • 8.83e3
  • 1.14e4
  • 1.64e4
  • 1.69e4
88.44
  • 88.44
  • 70.43
  • 61.70
  • 45.08
  • 43.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.78e3
  • 7.78e3
73.94
  • 73.94
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.47e3
  • 9.47e3
68.31
  • 68.31
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.50e3
  • 9.50e3
68.20
  • 68.20
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.74
  • 55.74
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.42
  • 47.42
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.82
  • 45.82
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
  • 1.92e4
44.57
  • 44.57
  • 35.64
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.45
  • 42.45
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.73e4
  • 1.73e4
41.92
  • 41.92
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
34.39
  • 34.39
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.47e4
  • 2.47e4
17.43
  • 17.43
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000045089 (APCS)
HGNCHGNC:584 (APCS)
Uniprot/SPTREMBLF1R6R2, F1R6R2_DANRE
ZFINZDB-GENE-081107-34 (si:ch211-270n8.1)

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