D. rerio Gene: si:dkey-222b8.1 - ENSDARG00000045094 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045094
Namesi:dkey-222b8.1
Descriptionsi:dkey-222b8.1 [Source:ZFIN;Acc:ZDB-GENE-060503-248]
OrganismDanio rerio (zebrafish)
Orthologs(s)5 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
1.76e3
  • 1.76e3
  • 5.69e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.15e3
  • 8.54e3
  • 1.50e4
  • 1.50e4
94.12
  • 94.12
  • 80.95
  • 74.99
  • 74.99
  • 73.32
  • 72.72
  • 71.42
  • 49.92
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.14e3
  • 6.14e3
79.46
  • 79.46
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
  • 1.54e4
65.51
  • 65.51
  • 48.31
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.59
  • 61.59
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.18e4
  • 1.18e4
  • 1.32e4
  • 1.45e4
  • 1.58e4
  • 1.68e4
60.36
  • 60.36
  • 55.73
  • 51.34
  • 47.11
  • 43.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.20e4
  • 1.20e4
59.95
  • 59.95
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.06
  • 58.06
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.28e4
  • 1.28e4
  • 1.42e4
57.16
  • 57.16
  • 52.53
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.78
  • 56.78
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.73
  • 55.73
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.36e4
  • 1.36e4
54.60
  • 54.60
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.36
  • 54.36
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.42e4
  • 1.42e4
  • 1.47e4
52.56
  • 52.56
  • 50.77
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.44
  • 50.44
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
  • 1.65e4
49.26
  • 49.26
  • 44.80
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.20
  • 47.20
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.08
  • 46.08
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.66e4
  • 1.66e4
  • 2.08e4
44.37
  • 44.37
  • 30.44
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.12
  • 41.12
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.72
  • 40.72
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.21
  • 37.21
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.40
  • 36.40
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
30.90
  • 30.90
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.22e4
  • 2.22e4
25.52
  • 25.52
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.25e4
  • 2.25e4
24.57
  • 24.57
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria5 species5 genesCompare expression

Orthology information comes from OMA : ENSDARG00000045094.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Bilateria3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000045094.

Cross-references

EnsemblENSDARG00000045094 (si:dkey-222b8.1)
ZFINZDB-GENE-060503-248 (si:dkey-222b8.1)
EMBLCR677591
Uniprot/SPTREMBLE7FFZ5, E7FFZ5_DANRE, Q1L8R8, Q1L8R8_DANRE

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