D. rerio Gene: FAM53C - ENSDARG00000045127 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045127
NameFAM53C
Descriptionzgc:175066 [Source:ZFIN;Acc:ZDB-GENE-091027-2]
OrganismDanio rerio (zebrafish)
Synonym(s)c5orf6

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.42e3
  • 2.42e3
91.89
  • 91.89
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.33e3
  • 3.33e3
88.84
  • 88.84
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000022Gastrula:Bud
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
3.36e3
  • 3.36e3
  • 4.82e3
  • 4.98e3
  • 5.84e3
  • 6.42e3
  • 6.54e3
  • 6.55e3
  • 6.60e3
  • 6.64e3
  • 6.68e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.83e3
  • 6.97e3
  • 7.03e3
  • 7.11e3
  • 7.29e3
  • 7.30e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.72e3
  • 8.78e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 1.28e4
  • 1.29e4
88.77
  • 88.77
  • 83.88
  • 83.33
  • 80.44
  • 78.51
  • 78.12
  • 78.09
  • 77.91
  • 77.77
  • 77.63
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.15
  • 76.66
  • 76.46
  • 76.18
  • 75.60
  • 75.57
  • 74.99
  • 74.99
  • 73.52
  • 70.79
  • 70.61
  • 69.99
  • 69.99
  • 69.44
  • 57.08
  • 56.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
3.68e3
  • 3.68e3
  • 3.99e3
  • 4.43e3
  • 6.81e3
  • 6.83e3
87.68
  • 87.68
  • 86.65
  • 85.16
  • 77.19
  • 77.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.71e3
  • 3.71e3
87.59
  • 87.59
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.90e3
  • 3.90e3
  • 1.46e4
86.95
  • 86.95
  • 50.96
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.95e3
  • 4.95e3
83.44
  • 83.44
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.09e3
  • 5.09e3
  • 1.03e4
82.96
  • 82.96
  • 65.50
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
5.12e3
  • 5.12e3
  • 5.33e3
  • 5.94e3
  • 6.19e3
  • 6.76e3
  • 7.09e3
  • 7.15e3
  • 7.32e3
  • 7.85e3
  • 7.91e3
82.87
  • 82.87
  • 82.16
  • 80.11
  • 79.27
  • 77.37
  • 76.27
  • 76.05
  • 75.50
  • 73.70
  • 73.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
5.43e3
  • 5.43e3
  • 5.67e3
  • 6.52e3
  • 6.73e3
  • 8.42e3
  • 9.28e3
81.84
  • 81.84
  • 81.01
  • 78.18
  • 77.48
  • 71.81
  • 68.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
5.73e3
  • 5.73e3
  • 8.13e3
80.82
  • 80.82
  • 72.78
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
5.88e3
  • 5.88e3
  • 6.77e3
  • 7.36e3
80.30
  • 80.30
  • 77.34
  • 75.34
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
6.28e3
  • 6.28e3
  • 6.79e3
  • 8.81e3
  • 9.02e3
78.99
  • 78.99
  • 77.28
  • 70.50
  • 69.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.38e3
  • 6.38e3
78.64
  • 78.64
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.41e3
  • 6.41e3
78.55
  • 78.55
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.44e3
  • 6.44e3
78.44
  • 78.44
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.56e3
  • 6.56e3
78.03
  • 78.03
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.52e3
  • 7.52e3
74.81
  • 74.81
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.83e3
  • 7.83e3
73.79
  • 73.79
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.19e3
  • 8.19e3
72.58
  • 72.58
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
8.24e3
  • 8.24e3
72.41
  • 72.41
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.40e3
  • 8.40e3
71.88
  • 71.88
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.62e3
  • 8.62e3
71.13
  • 71.13
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.36e3
  • 9.36e3
68.65
  • 68.65
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.69e3
  • 9.69e3
67.57
  • 67.57
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.18
  • 66.18
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.82
  • 64.82
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.49
  • 64.49
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
64.01
  • 64.01
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.11e4
  • 1.11e4
  • 1.13e4
62.71
  • 62.71
  • 62.21
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.13
  • 60.13
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.71
  • 59.71
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.62
  • 58.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC155320, BC171556, BX510945, CU462984
EnsemblENSDARG00000045127 (FAM53C)
HGNCHGNC:1336 (FAM53C)
Uniprot/SPTREMBLA9JTF4, A9JTF4_DANRE
ZFINZDB-GENE-091027-2 (zgc:175066)

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