D. rerio Gene: vdac1 - ENSDARG00000045132 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045132
Namevdac1
Descriptionvoltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
OrganismDanio rerio (zebrafish)
Synonym(s)fa13f11, vdac1, wu:fa13f11, zgc:85830
Orthologs(s)33 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
162
  • 162
  • 861
  • 1.08e3
  • 1.30e3
99.46
  • 99.46
  • 97.12
  • 96.39
  • 95.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
370
  • 370
  • 685
98.76
  • 98.76
  • 97.71
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
419
  • 419
  • 2.15e3
98.60
  • 98.60
  • 92.80
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
499
  • 499
98.33
  • 98.33
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
503
  • 503
  • 567
98.32
  • 98.32
  • 98.11
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
531
  • 531
  • 570
  • 604
  • 616
  • 742
  • 797
  • 942
  • 966
  • 1.16e3
  • 1.88e3
98.23
  • 98.23
  • 98.09
  • 97.98
  • 97.94
  • 97.52
  • 97.33
  • 96.85
  • 96.77
  • 96.12
  • 93.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
633
  • 633
  • 835
  • 853
97.88
  • 97.88
  • 97.21
  • 97.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
649
  • 649
  • 869
  • 965
  • 1.10e3
  • 1.11e3
  • 1.20e3
  • 1.24e3
  • 1.31e3
  • 1.44e3
  • 1.68e3
  • 1.92e3
  • 1.99e3
  • 2.47e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.08e3
  • 8.96e3
  • 8.96e3
  • 1.39e4
  • 1.50e4
97.83
  • 97.83
  • 97.09
  • 96.77
  • 96.31
  • 96.29
  • 95.98
  • 95.85
  • 95.62
  • 95.20
  • 94.39
  • 93.57
  • 93.35
  • 91.74
  • 83.33
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 73.52
  • 72.96
  • 69.99
  • 69.99
  • 53.30
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
718
  • 718
97.60
  • 97.60
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
782
  • 782
97.39
  • 97.39
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
940
  • 940
96.86
  • 96.86
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
974
  • 974
96.74
  • 96.74
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
977
  • 977
  • 1.36e3
  • 1.89e3
  • 1.97e3
  • 3.08e3
  • 3.19e3
96.73
  • 96.73
  • 95.46
  • 93.68
  • 93.41
  • 89.68
  • 89.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.04e3
  • 1.04e3
96.51
  • 96.51
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.12e3
  • 1.12e3
96.26
  • 96.26
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.20e3
  • 1.20e3
95.98
  • 95.98
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.21e3
  • 1.21e3
95.95
  • 95.95
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.21e3
  • 1.21e3
95.94
  • 95.94
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.22e3
  • 1.22e3
95.92
  • 95.92
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.31e3
  • 1.31e3
95.62
  • 95.62
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.44e3
  • 1.44e3
95.18
  • 95.18
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.55e3
  • 1.55e3
  • 2.64e3
94.82
  • 94.82
  • 91.16
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
1.60e3
  • 1.60e3
  • 1.83e3
  • 2.16e3
  • 2.97e3
  • 3.23e3
94.64
  • 94.64
  • 93.89
  • 92.75
  • 90.05
  • 89.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.63e3
  • 1.63e3
94.54
  • 94.54
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.85e3
  • 1.85e3
93.80
  • 93.80
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.96e3
  • 1.96e3
93.44
  • 93.44
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.04e3
  • 2.04e3
93.17
  • 93.17
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.69e3
  • 4.69e3
84.28
  • 84.28
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.07e3
  • 5.07e3
83.02
  • 83.02
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.30e3
  • 5.30e3
82.24
  • 82.24
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.62e3
  • 5.62e3
81.20
  • 81.20
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.05e3
  • 6.05e3
79.76
  • 79.76
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.17e3
  • 6.17e3
79.36
  • 79.36
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.95e3
  • 6.95e3
76.71
  • 76.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species20 genesCompare expression
Bilateria25 species33 genesCompare expression

Orthology information comes from OMA : ENSDARG00000045132.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000045132.

Cross-references

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