D. rerio Gene: hbbe2 - ENSDARG00000045143 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045143
Namehbbe2
Descriptionhemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
OrganismDanio rerio (zebrafish)
Orthologs(s)69 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
220
  • 220
  • 1.75e4
99.27
  • 99.27
  • 41.26
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
430
  • 430
  • 1.14e3
  • 1.24e3
  • 1.45e3
  • 1.83e3
  • 2.46e3
  • 4.35e3
  • 1.32e4
  • 1.78e4
98.56
  • 98.56
  • 96.19
  • 95.86
  • 95.14
  • 93.89
  • 91.77
  • 85.43
  • 55.82
  • 40.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
471
  • 471
  • 701
  • 841
  • 2.49e3
  • 2.50e3
  • 3.28e3
  • 4.52e3
  • 1.52e4
  • 1.52e4
98.43
  • 98.43
  • 97.65
  • 97.19
  • 91.68
  • 91.64
  • 89.03
  • 84.88
  • 49.20
  • 49.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
606
  • 606
97.97
  • 97.97
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
669
  • 669
  • 709
  • 1.23e3
97.76
  • 97.76
  • 97.63
  • 95.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.34e3
  • 3.34e3
88.81
  • 88.81
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
4.14e3
  • 4.14e3
  • 2.34e4
86.14
  • 86.14
  • 21.69
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.34e3
  • 5.34e3
82.13
  • 82.13
AEIR
  • AEIR
CL:0000562nucleate erythrocyte
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
7.47e3
  • 7.47e3
  • 1.49e4
  • 1.49e4
75.00
  • 75.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.71e3
  • 7.71e3
74.18
  • 74.18
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
8.65e3
  • 8.65e3
71.03
  • 71.03
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.44
  • 65.44
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.10e4
  • 1.10e4
  • 1.18e4
63.13
  • 63.13
  • 60.46
AEIR
  • AEIR
  • AEIR
CL:0000764erythroid lineage cell
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.12e4
  • 1.12e4
  • 1.49e4
62.50
  • 62.50
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:2000033intermediate cell mass of mesoderm
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.12e4
  • 1.12e4
  • 1.28e4
  • 1.34e4
62.50
  • 62.50
  • 57.13
  • 55.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.33
  • 56.33
AEIR
  • AEIR
UBERON:0000178blood
  • ZFS:0000033Hatching:Long-pec
1.31e4
  • 1.31e4
56.24
  • 56.24
AEIR
  • AEIR
UBERON:0009910posterior lateral plate mesoderm
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.56e4
  • 1.56e4
  • 1.75e4
47.73
  • 47.73
  • 41.42
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.61e4
  • 1.61e4
46.14
  • 46.14
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
43.99
  • 43.99
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.83
  • 42.83
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.42
  • 39.42
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
36.20
  • 36.20
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
35.95
  • 35.95
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.34e4
  • 2.34e4
21.58
  • 21.58
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.48e4
  • 2.48e4
16.92
  • 16.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species69 genesCompare expression

Orthology information comes from OMA : ENSDARG00000045143.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Otophysi4 genesCompare expression
Neopterygii6 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000045143.

Cross-references

EnsemblENSDARG00000045143 (hbbe2)
ZFINZDB-GENE-040702-1 (hbbe2)
EMBLAY329629, BC139602, CR352324
Uniprot/SPTREMBLQ7T1B0, Q7T1B0_DANRE

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