D. rerio Gene: hbbe2 - ENSDARG00000045143 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045143
Namehbbe2
Descriptionhemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
430
  • 430
  • 1.24e3
  • 1.45e3
  • 1.54e3
  • 1.81e3
  • 2.45e3
  • 4.32e3
  • 1.31e4
  • 1.77e4
98.55039
  • 98.55039
  • 95.82580
  • 95.11424
  • 94.80168
  • 93.87673
  • 91.70793
  • 85.39905
  • 55.72552
  • 40.27188
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
468
  • 468
  • 696
  • 835
  • 2.47e3
  • 2.48e3
  • 3.25e3
  • 4.48e3
  • 1.51e4
98.42313
  • 98.42313
  • 97.64961
  • 97.18248
  • 91.66237
  • 91.62473
  • 89.00854
  • 84.84632
  • 49.08727
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
606
  • 606
  • 2.53e4
97.95568
  • 97.95568
  • 14.42381
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
860
  • 860
  • 1.22e3
  • 1.64e3
97.09695
  • 97.09695
  • 95.87214
  • 94.45612
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.34e3
  • 3.34e3
88.70674
  • 88.70674
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
4.11e3
  • 4.11e3
  • 1.61e4
86.11300
  • 86.11300
  • 45.73333
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.30e3
  • 5.30e3
82.09585
  • 82.09585
AEIR
  • AEIR
CL:0000562nucleate erythrocyte
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
7.40e3
  • 7.40e3
  • 1.48e4
  • 1.48e4
74.99998
  • 74.99998
  • 50.00169
  • 50.00000
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.71e3
  • 7.71e3
73.93406
  • 73.93406
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
8.59e3
  • 8.59e3
70.96589
  • 70.96589
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.36809
  • 65.36809
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.09e4
  • 1.09e4
  • 1.17e4
63.05340
  • 63.05340
  • 60.37328
AEIR
  • AEIR
  • AEIR
CL:0000764erythroid lineage cell
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.11e4
  • 1.11e4
  • 1.48e4
62.49830
  • 62.49830
  • 49.99831
AEIR
  • AEIR
  • AEIR
UBERON:2000033intermediate cell mass of mesoderm
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.11e4
  • 1.11e4
  • 1.27e4
  • 1.32e4
62.49830
  • 62.49830
  • 57.12595
  • 55.23779
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • ZFS:0000033Hatching:Long-pec
1.29e4
  • 1.29e4
56.24156
  • 56.24156
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
55.92034
  • 55.92034
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.10082
  • 52.10082
AEIR
  • AEIR
UBERON:0009910posterior lateral plate mesoderm
  • ZFS:0000029Pharyngula:Prim-5
1.48e4
  • 1.48e4
50.00000
  • 50.00000
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
46.81326
  • 46.81326
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.60e4
  • 1.60e4
46.02535
  • 46.02535
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
43.60266
  • 43.60266
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
43.46746
  • 43.46746
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.29801
  • 42.29801
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
38.85387
  • 38.85387
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.54e4
  • 2.54e4
14.03508
  • 14.03508
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLAY329629, BC139602, CR352324
EnsemblENSDARG00000045143 (hbbe2)
Uniprot/SPTREMBLQ7T1B0, Q7T1B0_DANRE
ZFINZDB-GENE-040702-1 (hbbe2)

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