D. rerio Gene: trappc3 - ENSDARG00000045364 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045364
Nametrappc3
Descriptiontrafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:101005

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.84e3
  • 1.84e3
93.85
  • 93.85
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.24e3
  • 2.24e3
92.50
  • 92.50
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.68e3
  • 2.68e3
91.02
  • 91.02
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
2.85e3
  • 2.85e3
  • 3.14e3
  • 3.17e3
  • 3.84e3
  • 4.90e3
90.46
  • 90.46
  • 89.47
  • 89.38
  • 87.16
  • 83.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.95e3
  • 2.95e3
90.11
  • 90.11
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.11e3
  • 3.11e3
89.58
  • 89.58
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.28e3
  • 3.28e3
  • 4.88e3
89.01
  • 89.01
  • 83.67
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
3.45e3
  • 3.45e3
  • 3.89e3
88.46
  • 88.46
  • 86.97
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.05e3
  • 4.05e3
86.46
  • 86.46
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.07e3
  • 4.07e3
86.36
  • 86.36
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.15e3
  • 4.15e3
86.11
  • 86.11
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.32e3
  • 4.32e3
85.53
  • 85.53
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.47e3
  • 4.47e3
85.05
  • 85.05
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.50e3
  • 4.50e3
84.95
  • 84.95
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.59e3
  • 4.59e3
84.64
  • 84.64
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.77e3
  • 4.77e3
  • 4.80e3
84.02
  • 84.02
  • 83.94
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
4.89e3
  • 4.89e3
  • 8.64e3
83.62
  • 83.62
  • 71.06
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.92e3
  • 4.92e3
83.52
  • 83.52
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.76e3
  • 5.76e3
80.70
  • 80.70
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.10e3
  • 6.10e3
79.56
  • 79.56
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.02e3
  • 7.02e3
76.49
  • 76.49
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
7.55e3
  • 7.55e3
74.72
  • 74.72
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.98e3
  • 7.98e3
73.29
  • 73.29
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.12e4
  • 1.12e4
  • 1.15e4
62.47
  • 62.47
  • 61.49
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.32e4
  • 1.32e4
55.82
  • 55.82
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX927161
EnsemblENSDARG00000045364 (trappc3)
Uniprot/SPTREMBLQ1LUV8, Q1LUV8_DANRE
ZFINZDB-GENE-040801-120 (trappc3)

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