D. rerio Gene: tagln - ENSDARG00000045408 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045408
Nametagln
Descriptiontransgelin [Source:ZFIN;Acc:ZDB-GENE-070912-1]
OrganismDanio rerio (zebrafish)
Synonym(s)sm22, sm22alpha-b, zgc:153186

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
297
  • 297
99.01
  • 99.01
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
441
  • 441
98.53
  • 98.53
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
691
  • 691
97.69
  • 97.69
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
721
  • 721
  • 4.17e3
97.59
  • 97.59
  • 86.04
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
743
  • 743
97.52
  • 97.52
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
884
  • 884
97.04
  • 97.04
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.59e3
  • 1.59e3
  • 4.83e3
  • 5.56e3
94.69
  • 94.69
  • 83.84
  • 81.40
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.71e3
  • 1.71e3
94.28
  • 94.28
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.83e3
  • 1.83e3
  • 1.36e4
  • 1.51e4
  • 1.67e4
  • 1.80e4
93.88
  • 93.88
  • 54.45
  • 49.48
  • 44.23
  • 39.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.98e3
  • 1.98e3
93.37
  • 93.37
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.47e3
  • 2.47e3
91.74
  • 91.74
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.92e3
  • 2.92e3
90.23
  • 90.23
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.12e3
  • 3.12e3
89.57
  • 89.57
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.27e3
  • 3.27e3
  • 1.05e4
89.06
  • 89.06
  • 64.85
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.52e3
  • 3.52e3
88.22
  • 88.22
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • UBERON:0000104life cycle
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
3.70e3
  • 3.70e3
  • 5.83e3
  • 6.52e3
  • 7.12e3
  • 1.50e4
  • 1.58e4
  • 1.63e4
  • 1.65e4
87.61
  • 87.61
  • 80.49
  • 78.17
  • 76.15
  • 49.92
  • 47.17
  • 45.37
  • 44.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.39e3
  • 6.39e3
78.60
  • 78.60
AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000039Larval:Days 7-13
  • ZFS:0000034Hatching:Pec-fin
6.40e3
  • 6.40e3
  • 9.33e3
  • 1.31e4
  • 1.49e4
  • 1.49e4
78.57
  • 78.57
  • 68.74
  • 56.23
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005805dorsal aorta
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000034Hatching:Pec-fin
7.47e3
  • 7.47e3
  • 1.24e4
  • 1.46e4
  • 1.49e4
  • 1.49e4
75.00
  • 75.00
  • 58.33
  • 51.17
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
8.99e3
  • 8.99e3
69.91
  • 69.91
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
9.22e3
  • 9.22e3
69.13
  • 69.13
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.27
  • 59.27
AEIR
  • AEIR
UBERON:0006859swim bladder bud
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
1.24e4
  • 1.24e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
58.33
  • 58.33
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.37
  • 54.37
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.41
  • 53.41
AEIR
  • AEIR
CL:0000192smooth muscle cell
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0003085ventral aorta
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0004152bulbus arteriosus
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2001053future internal carotid artery
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2001054lateral dorsal aorta
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2005080anterior mesenteric artery
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
CL:0000037hematopoietic stem cell
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0008897fin
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
  • 1.50e4
  • 1.50e4
49.99
  • 49.99
  • 49.94
  • 49.91
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.80e4
  • 1.80e4
39.71
  • 39.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC122180, CU469509
EnsemblENSDARG00000045408 (tagln)
Uniprot/SPTREMBLQ0P4B4, Q0P4B4_DANRE
ZFINZDB-GENE-070912-1 (tagln)

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