D. rerio Gene: epdr1 - ENSDARG00000045420 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045420
Nameepdr1
Descriptionependymin related 1 [Source:ZFIN;Acc:ZDB-GENE-040718-113]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:92674

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.95e3
  • 1.95e3
93.49
  • 93.49
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.12e3
  • 2.12e3
  • 1.49e4
92.90
  • 92.90
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
2.55e3
  • 2.55e3
  • 4.41e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 6.97e3
  • 7.03e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.96e3
  • 8.96e3
  • 1.47e4
  • 1.49e4
91.46
  • 91.46
  • 85.22
  • 83.33
  • 78.12
  • 77.77
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.66
  • 76.46
  • 76.46
  • 74.99
  • 74.99
  • 74.99
  • 74.99
  • 73.52
  • 69.99
  • 69.99
  • 50.68
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.17e3
  • 4.17e3
  • 7.86e3
86.05
  • 86.05
  • 73.69
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.20e3
  • 4.20e3
85.92
  • 85.92
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
5.66e3
  • 5.66e3
  • 1.50e4
81.04
  • 81.04
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.26e3
  • 6.26e3
  • 7.42e3
79.03
  • 79.03
  • 75.14
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.60e3
  • 6.60e3
77.90
  • 77.90
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
6.71e3
  • 6.71e3
  • 1.02e4
77.52
  • 77.52
  • 65.99
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.03e3
  • 7.03e3
76.46
  • 76.46
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
7.34e3
  • 7.34e3
  • 1.02e4
  • 1.04e4
  • 1.14e4
  • 1.44e4
75.42
  • 75.42
  • 66.00
  • 65.10
  • 61.73
  • 51.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
7.62e3
  • 7.62e3
  • 1.32e4
74.50
  • 74.50
  • 55.89
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
7.85e3
  • 7.85e3
  • 1.01e4
73.72
  • 73.72
  • 66.11
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.24e3
  • 9.24e3
69.06
  • 69.06
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.44e3
  • 9.44e3
68.39
  • 68.39
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.29
  • 65.29
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.00
  • 55.00
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.58
  • 54.58
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.03
  • 54.03
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.80
  • 53.80
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.69
  • 52.69
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.47
  • 50.47
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.80
  • 40.80
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.48
  • 31.48
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC076158, BX323064
EnsemblENSDARG00000045420 (epdr1)
Uniprot/SPTREMBLQ6DH25, Q6DH25_DANRE
ZFINZDB-GENE-040718-113 (epdr1)

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