D. rerio Gene: zgc:173856 - ENSDARG00000045424 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045424
Namezgc:173856
Descriptionzgc:173856 [Source:ZFIN;Acc:ZDB-GENE-030131-5358]
OrganismDanio rerio (zebrafish)
Synonym(s)fd14f05, fd20f07, wu:fd14f05, wu:fd20f07, wu:fy58a05

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
80.8
  • 80.8
99.73
  • 99.73
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
105
  • 105
99.65
  • 99.65
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
225
  • 225
99.25
  • 99.25
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
435
  • 435
98.55
  • 98.55
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
582
  • 582
98.05
  • 98.05
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
694
  • 694
97.68
  • 97.68
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.22e3
  • 2.22e3
92.57
  • 92.57
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.61e3
  • 3.61e3
87.92
  • 87.92
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.83e3
  • 4.83e3
83.83
  • 83.83
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
5.56e3
  • 5.56e3
  • 5.63e3
81.38
  • 81.38
  • 81.14
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.75e3
  • 6.75e3
77.39
  • 77.39
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.91e3
  • 6.91e3
  • 1.14e4
76.85
  • 76.85
  • 61.79
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.87e3
  • 7.87e3
73.66
  • 73.66
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.42e3
  • 8.42e3
71.80
  • 71.80
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.97
  • 59.97
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.13
  • 49.13
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.37
  • 30.37
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.77
  • 27.77
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.34e4
  • 2.34e4
21.73
  • 21.73
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.41e4
  • 2.41e4
19.15
  • 19.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX571823
EnsemblENSDARG00000045424 (zgc:173856)
Uniprot/SPTREMBLF1RAU3, F1RAU3_DANRE
ZFINZDB-GENE-030131-5358 (zgc:173856)

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