D. rerio Gene: lancl2 - ENSDARG00000045465 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045465
Namelancl2
DescriptionLanC lantibiotic synthetase component C-like 2 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-070209-191]
OrganismDanio rerio (zebrafish)
Synonym(s)f1qf03, zgc:158293

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
3.23e3
  • 3.23e3
89.19
  • 89.19
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.20e3
  • 4.20e3
85.96
  • 85.96
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
5.46e3
  • 5.46e3
  • 5.87e3
  • 6.31e3
  • 8.60e3
  • 1.07e4
81.73
  • 81.73
  • 80.36
  • 78.86
  • 71.20
  • 64.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.00e3
  • 6.00e3
  • 9.60e3
79.90
  • 79.90
  • 67.86
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.57e3
  • 6.57e3
78.00
  • 78.00
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.00e3
  • 7.00e3
76.57
  • 76.57
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
7.57e3
  • 7.57e3
  • 7.95e3
74.64
  • 74.64
  • 73.38
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
7.61e3
  • 7.61e3
  • 8.30e3
74.52
  • 74.52
  • 72.21
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
7.79e3
  • 7.79e3
73.91
  • 73.91
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.91e3
  • 7.91e3
73.51
  • 73.51
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.08e3
  • 8.08e3
72.95
  • 72.95
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
8.31e3
  • 8.31e3
  • 1.05e4
72.19
  • 72.19
  • 64.96
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.74e3
  • 8.74e3
70.75
  • 70.75
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.79e3
  • 8.79e3
70.58
  • 70.58
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
8.90e3
  • 8.90e3
  • 9.71e3
70.19
  • 70.19
  • 67.48
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.07e3
  • 9.07e3
69.65
  • 69.65
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.96e3
  • 9.96e3
66.65
  • 66.65
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.19
  • 66.19
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.04e4
  • 1.04e4
65.22
  • 65.22
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.12
  • 63.12
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.21
  • 62.21
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.78
  • 59.78
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.88
  • 57.88
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.85
  • 57.85
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.26
  • 55.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCU467964, FP016176
EnsemblENSDARG00000045465 (lancl2)
Uniprot/SPTREMBLF1QHX0, F1QHX0_DANRE
ZFINZDB-GENE-070209-191 (lancl2)

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