D. rerio Gene: stk38l - ENSDARG00000045482 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045482
Namestk38l
Descriptionserine/threonine kinase 38 like [Source:ZFIN;Acc:ZDB-GENE-040426-798]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:55777
Orthologs(s)24 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.96e3
  • 1.96e3
  • 6.77e3
  • 6.85e3
  • 9.29e3
  • 1.05e4
  • 1.14e4
  • 1.21e4
  • 1.22e4
  • 1.24e4
  • 1.25e4
  • 1.25e4
  • 1.25e4
  • 1.31e4
  • 1.49e4
  • 1.49e4
  • 1.50e4
93.42
  • 93.42
  • 77.33
  • 77.05
  • 68.89
  • 64.86
  • 61.74
  • 59.37
  • 59.28
  • 58.39
  • 58.15
  • 58.00
  • 57.99
  • 56.00
  • 50.25
  • 50.20
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
2.01e3
  • 2.01e3
  • 2.45e3
  • 3.49e3
  • 4.26e3
  • 4.41e3
93.26
  • 93.26
  • 91.80
  • 88.33
  • 85.75
  • 85.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
3.39e3
  • 3.39e3
88.66
  • 88.66
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.52e3
  • 3.52e3
88.23
  • 88.23
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.84e3
  • 3.84e3
87.15
  • 87.15
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
4.40e3
  • 4.40e3
  • 5.95e3
85.28
  • 85.28
  • 80.07
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.22e3
  • 5.22e3
82.52
  • 82.52
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.50e3
  • 5.50e3
  • 1.21e4
81.58
  • 81.58
  • 59.44
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.55e3
  • 5.55e3
81.41
  • 81.41
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
5.66e3
  • 5.66e3
  • 7.83e3
  • 8.89e3
  • 9.28e3
81.04
  • 81.04
  • 73.79
  • 70.23
  • 68.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
6.22e3
  • 6.22e3
  • 9.22e3
  • 1.18e4
  • 1.37e4
  • 1.39e4
79.18
  • 79.18
  • 69.14
  • 60.51
  • 54.04
  • 53.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.31e3
  • 6.31e3
78.87
  • 78.87
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
6.45e3
  • 6.45e3
  • 6.73e3
  • 7.50e3
  • 1.04e4
  • 1.06e4
  • 1.08e4
  • 1.20e4
  • 1.22e4
  • 1.26e4
  • 1.30e4
78.39
  • 78.39
  • 77.45
  • 74.88
  • 65.22
  • 64.63
  • 63.99
  • 59.72
  • 59.04
  • 57.71
  • 56.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.64e3
  • 6.64e3
77.77
  • 77.77
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.81e3
  • 6.81e3
77.21
  • 77.21
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
7.03e3
  • 7.03e3
76.45
  • 76.45
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
7.05e3
  • 7.05e3
  • 8.69e3
  • 9.83e3
76.39
  • 76.39
  • 70.90
  • 67.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.16e3
  • 7.16e3
76.03
  • 76.03
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
7.45e3
  • 7.45e3
  • 9.43e3
  • 1.21e4
75.07
  • 75.07
  • 68.44
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.46e3
  • 7.46e3
75.04
  • 75.04
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
9.70e3
  • 9.70e3
  • 1.10e4
  • 1.12e4
  • 1.12e4
  • 1.31e4
  • 1.35e4
67.53
  • 67.53
  • 63.32
  • 62.49
  • 62.48
  • 56.23
  • 54.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
9.85e3
  • 9.85e3
  • 1.50e4
67.01
  • 67.01
  • 49.92
AEIR
  • AEIR
  • AEIR
ZFA:0005738intestinal bulb primordium (Danio)
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
9.96e3
  • 9.96e3
  • 9.96e3
66.66
  • 66.66
  • 66.66
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.01e4
  • 1.01e4
66.17
  • 66.17
AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.05e4
  • 1.05e4
  • 1.05e4
  • 1.12e4
  • 1.14e4
  • 1.14e4
64.69
  • 64.69
  • 64.69
  • 62.48
  • 61.75
  • 61.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
1.08e4
  • 1.08e4
  • 1.14e4
  • 1.16e4
63.87
  • 63.87
  • 61.75
  • 61.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003894liver primordium
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.12e4
  • 1.12e4
  • 1.16e4
  • 1.16e4
62.49
  • 62.49
  • 61.10
  • 61.10
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.40
  • 62.40
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.09
  • 62.09
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
1.14e4
  • 1.14e4
  • 1.20e4
  • 1.23e4
  • 1.25e4
  • 1.39e4
61.88
  • 61.88
  • 59.98
  • 58.80
  • 58.31
  • 53.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.14e4
  • 1.14e4
  • 1.14e4
61.75
  • 61.75
  • 61.75
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.15e4
  • 1.15e4
61.58
  • 61.58
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.17e4
  • 1.17e4
  • 1.18e4
  • 1.20e4
  • 1.23e4
  • 1.23e4
  • 1.26e4
  • 1.28e4
  • 1.31e4
60.70
  • 60.70
  • 60.50
  • 59.98
  • 58.80
  • 58.80
  • 57.68
  • 57.13
  • 56.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003050olfactory placode
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.20e4
  • 1.20e4
  • 1.25e4
  • 1.25e4
59.98
  • 59.98
  • 58.31
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.56
  • 55.56
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.47
  • 50.47
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.07
  • 50.07
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.22
  • 48.22
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.76
  • 47.76
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.28
  • 45.28
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000045482.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000045482.

Cross-references

EnsemblENSDARG00000045482 (stk38l)
ZFINZDB-GENE-040426-798 (stk38l)
EMBLBX649380, BX855588
Uniprot/SPTREMBLQ5RH05, Q5RH05_DANRE

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