D. rerio Gene: dcp1b - ENSDARG00000045484 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045484
Namedcp1b
Descriptiondecapping mRNA 1B [Source:ZFIN;Acc:ZDB-GENE-040819-1]
OrganismDanio rerio (zebrafish)
Synonym(s)mitc1l, si:ch211-87p6none

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
4.52e3
  • 4.52e3
  • 4.74e3
84.85
  • 84.85
  • 84.14
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.27e3
  • 5.27e3
82.35
  • 82.35
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
6.29e3
  • 6.29e3
  • 1.05e4
78.94
  • 78.94
  • 64.84
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.51e3
  • 6.51e3
78.20
  • 78.20
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.80e3
  • 6.80e3
77.23
  • 77.23
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.82e3
  • 6.82e3
77.18
  • 77.18
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
6.96e3
  • 6.96e3
  • 9.90e3
76.71
  • 76.71
  • 66.84
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
6.99e3
  • 6.99e3
  • 7.01e3
  • 7.87e3
  • 9.48e3
  • 1.06e4
76.59
  • 76.59
  • 76.53
  • 73.63
  • 68.24
  • 64.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.05e3
  • 7.05e3
76.39
  • 76.39
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.08e3
  • 7.08e3
76.30
  • 76.30
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
7.14e3
  • 7.14e3
  • 1.18e4
76.10
  • 76.10
  • 60.58
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.29e3
  • 7.29e3
75.59
  • 75.59
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.52e3
  • 7.52e3
74.82
  • 74.82
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.63e3
  • 7.63e3
74.46
  • 74.46
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.82e3
  • 7.82e3
73.80
  • 73.80
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.05e3
  • 8.05e3
73.04
  • 73.04
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.27e3
  • 8.27e3
72.32
  • 72.32
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.33e3
  • 8.33e3
72.11
  • 72.11
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
9.49e3
  • 9.49e3
68.23
  • 68.23
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.76e3
  • 9.76e3
67.32
  • 67.32
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
9.95e3
  • 9.95e3
  • 1.04e4
66.70
  • 66.70
  • 65.20
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.21
  • 65.21
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.23
  • 60.23
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.04
  • 57.04
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.94
  • 49.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX649380
EnsemblENSDARG00000045484 (dcp1b)
Uniprot/SPTREMBLF1RC83, F1RC83_DANRE, Q5RH08, Q5RH08_DANRE
ZFINZDB-GENE-040819-1 (dcp1b)

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