D. rerio Gene: gramd4b - ENSDARG00000045506 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045506
Namegramd4b
DescriptionGRAM domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4780]
OrganismDanio rerio (zebrafish)
Synonym(s)fd60a08, si:ch73-230f23.1, wu:fd60a08

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.46e3
  • 4.46e3
85.06
  • 85.06
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.66e3
  • 4.66e3
84.40
  • 84.40
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.73e3
  • 4.73e3
84.17
  • 84.17
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
5.02e3
  • 5.02e3
  • 5.54e3
  • 9.85e3
  • 1.01e4
83.21
  • 83.21
  • 81.44
  • 67.00
  • 66.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.10e3
  • 5.10e3
  • 1.17e4
82.94
  • 82.94
  • 60.89
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.15e3
  • 5.15e3
  • 9.42e3
82.76
  • 82.76
  • 68.46
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.27e3
  • 5.27e3
82.36
  • 82.36
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
5.34e3
  • 5.34e3
82.12
  • 82.12
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.45e3
  • 5.45e3
81.74
  • 81.74
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.72e3
  • 5.72e3
80.85
  • 80.85
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.96e3
  • 5.96e3
80.04
  • 80.04
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.24e3
  • 6.24e3
79.10
  • 79.10
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.44e3
  • 6.44e3
78.43
  • 78.43
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
6.46e3
  • 6.46e3
  • 8.88e3
  • 9.52e3
  • 1.18e4
  • 1.52e4
78.37
  • 78.37
  • 70.27
  • 68.14
  • 60.33
  • 48.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.56e3
  • 6.56e3
78.03
  • 78.03
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
7.04e3
  • 7.04e3
  • 1.24e4
76.44
  • 76.44
  • 58.37
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.09e3
  • 7.09e3
76.27
  • 76.27
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
7.58e3
  • 7.58e3
74.61
  • 74.61
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
9.38e3
  • 9.38e3
  • 1.00e4
  • 1.12e4
  • 1.26e4
  • 1.37e4
  • 1.38e4
  • 1.39e4
  • 1.41e4
  • 1.42e4
  • 1.42e4
68.58
  • 68.58
  • 66.42
  • 62.39
  • 57.78
  • 54.11
  • 53.75
  • 53.46
  • 52.84
  • 52.54
  • 52.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • UBERON:0000104life cycle
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
9.41e3
  • 9.41e3
  • 1.43e4
  • 1.45e4
  • 1.50e4
  • 1.51e4
  • 1.52e4
  • 1.54e4
  • 1.55e4
  • 1.55e4
  • 1.55e4
  • 1.56e4
  • 1.57e4
  • 1.58e4
  • 1.58e4
  • 1.66e4
68.49
  • 68.49
  • 52.06
  • 51.32
  • 49.92
  • 49.43
  • 49.25
  • 48.55
  • 48.21
  • 48.20
  • 48.01
  • 47.81
  • 47.50
  • 47.18
  • 47.01
  • 44.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.45e3
  • 9.45e3
68.35
  • 68.35
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
9.68e3
  • 9.68e3
  • 1.18e4
  • 1.21e4
67.59
  • 67.59
  • 60.55
  • 59.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.82e3
  • 9.82e3
67.11
  • 67.11
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.28
  • 65.28
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.14e4
  • 1.14e4
61.67
  • 61.67
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.32e4
  • 1.32e4
55.67
  • 55.67
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.44e4
  • 1.44e4
51.85
  • 51.85
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
1.49e4
  • 1.49e4
  • 1.53e4
  • 1.75e4
50.11
  • 50.11
  • 48.68
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.06
  • 37.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCU929369
EnsemblENSDARG00000045506 (gramd4b)
Uniprot/SPTREMBLE7F6T2, E7F6T2_DANRE, X1WDK4, X1WDK4_DANRE
ZFINZDB-GENE-030131-4780 (gramd4b)

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