D. rerio Gene: sco2 - ENSDARG00000045555 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045555
Namesco2
DescriptionSCO2 cytochrome c oxidase assembly protein [Source:ZFIN;Acc:ZDB-GENE-041210-173]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-202b22.3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.62e3
  • 4.62e3
84.37600
  • 84.37600
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.78e3
  • 5.78e3
80.47082
  • 80.47082
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.95e3
  • 5.95e3
79.89306
  • 79.89306
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.77e3
  • 6.77e3
77.12470
  • 77.12470
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
6.88e3
  • 6.88e3
  • 9.68e3
  • 9.89e3
  • 1.14e4
  • 1.23e4
76.74612
  • 76.74612
  • 67.29252
  • 66.57597
  • 61.33318
  • 58.50841
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.02e3
  • 7.02e3
76.29310
  • 76.29310
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.04e3
  • 7.04e3
76.22564
  • 76.22564
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
8.03e3
  • 8.03e3
72.86296
  • 72.86296
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.30e3
  • 8.30e3
71.94666
  • 71.94666
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.39e3
  • 8.39e3
71.63571
  • 71.63571
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.45e3
  • 8.45e3
71.42937
  • 71.42937
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.08e3
  • 9.08e3
69.30357
  • 69.30357
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.13e3
  • 9.13e3
69.13457
  • 69.13457
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
9.34e3
  • 9.34e3
68.43902
  • 68.43902
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.36e3
  • 9.36e3
  • 9.97e3
68.35900
  • 68.35900
  • 66.29882
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
62.94594
  • 62.94594
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
61.69713
  • 61.69713
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.24584
  • 61.24584
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX649398
EnsemblENSDARG00000045555 (sco2)
Uniprot/SWISSPROTQ5RH02, SCO2_DANRE
ZFINZDB-GENE-041210-173 (sco2)

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