D. rerio Gene: socs2 - ENSDARG00000045557 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045557
Namesocs2
Descriptionsuppressor of cytokine signaling 2 [Source:ZFIN;Acc:ZDB-GENE-041210-171]
OrganismDanio rerio (zebrafish)
Synonym(s)f1qhr7, si:dkey-202b22.1, socs2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.99e3
  • 3.99e3
86.64
  • 86.64
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.15e3
  • 4.15e3
86.12
  • 86.12
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.74e3
  • 5.74e3
80.78
  • 80.78
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.08e3
  • 7.08e3
  • 1.23e4
76.29
  • 76.29
  • 58.78
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.03e3
  • 8.03e3
73.13
  • 73.13
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.07e3
  • 8.07e3
72.96
  • 72.96
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.60e3
  • 8.60e3
71.20
  • 71.20
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.87e3
  • 8.87e3
70.30
  • 70.30
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
9.73e3
  • 9.73e3
  • 1.22e4
67.42
  • 67.42
  • 59.08
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.82e3
  • 9.82e3
67.13
  • 67.13
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.53
  • 66.53
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.46
  • 66.46
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.01e4
  • 1.01e4
  • 1.43e4
  • 1.49e4
  • 1.73e4
  • 1.81e4
66.18
  • 66.18
  • 52.06
  • 50.05
  • 41.94
  • 39.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.06e4
  • 1.06e4
  • 1.67e4
64.36
  • 64.36
  • 43.95
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.80
  • 59.80
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.56
  • 59.56
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.96
  • 57.96
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.41e4
  • 1.41e4
  • 1.71e4
52.65
  • 52.65
  • 42.79
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.80
  • 51.80
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.54
  • 50.54
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.62e4
  • 1.62e4
  • 1.73e4
45.74
  • 45.74
  • 41.92
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.70e4
  • 1.70e4
43.23
  • 43.23
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.78e4
  • 1.78e4
40.37
  • 40.37
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.44
  • 38.44
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX649398, EF195761
EnsemblENSDARG00000045557 (socs2)
Uniprot/SPTREMBLB0EVP5, B0EVP5_DANRE
ZFINZDB-GENE-041210-171 (socs2)

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