D. rerio Gene: pus1 - ENSDARG00000045562 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045562
Namepus1
Descriptionpseudouridylate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-26]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fb98h11, zgc:103516

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
528
  • 528
98.24
  • 98.24
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
756
  • 756
  • 1.75e3
97.47
  • 97.47
  • 94.14
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.02e3
  • 1.02e3
96.60
  • 96.60
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.55e3
  • 2.55e3
  • 4.41e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 6.97e3
  • 7.03e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.96e3
  • 8.96e3
  • 1.41e4
  • 1.42e4
  • 1.47e4
91.46
  • 91.46
  • 85.22
  • 83.33
  • 78.12
  • 77.77
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.66
  • 76.46
  • 76.46
  • 74.99
  • 74.99
  • 74.99
  • 74.99
  • 73.52
  • 69.99
  • 69.99
  • 52.63
  • 52.43
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.70e3
  • 2.70e3
90.98
  • 90.98
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.80e3
  • 2.80e3
90.64
  • 90.64
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.53e3
  • 3.53e3
88.18
  • 88.18
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
3.66e3
  • 3.66e3
  • 3.75e3
87.76
  • 87.76
  • 87.45
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.20e3
  • 4.20e3
85.94
  • 85.94
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
4.62e3
  • 4.62e3
  • 5.00e3
  • 6.19e3
  • 9.25e3
  • 1.06e4
84.52
  • 84.52
  • 83.27
  • 79.28
  • 69.02
  • 64.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.62e3
  • 5.62e3
81.18
  • 81.18
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.87e3
  • 5.87e3
80.36
  • 80.36
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
6.78e3
  • 6.78e3
  • 9.56e3
77.31
  • 77.31
  • 68.01
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
6.87e3
  • 6.87e3
  • 1.47e4
77.00
  • 77.00
  • 50.88
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.08e3
  • 7.08e3
  • 1.13e4
76.29
  • 76.29
  • 62.33
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.49e3
  • 7.49e3
74.93
  • 74.93
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.13e3
  • 8.13e3
72.77
  • 72.77
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.81e3
  • 8.81e3
70.49
  • 70.49
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.87e3
  • 8.87e3
70.29
  • 70.29
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.18e3
  • 9.18e3
69.26
  • 69.26
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.38e3
  • 9.38e3
68.58
  • 68.58
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.29
  • 66.29
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
  • 1.34e4
65.05
  • 65.05
  • 55.13
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.56
  • 64.56
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.10
  • 63.10
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.43e4
  • 1.43e4
52.25
  • 52.25
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

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