D. rerio Gene: tnni2a.1 - ENSDARG00000045592 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045592
Nametnni2a.1
Descriptiontroponin I type 2a (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041114-60]
OrganismDanio rerio (zebrafish)
Synonym(s)tropi-1a, zgc:103650

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
257
  • 257
  • 7.12e3
99.14
  • 99.14
  • 76.15
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
267
  • 267
99.11
  • 99.11
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
510
  • 510
  • 2.05e4
98.30
  • 98.30
  • 31.31
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
1.61e3
  • 1.61e3
94.62
  • 94.62
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.46e3
  • 2.46e3
91.76
  • 91.76
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.05e3
  • 4.05e3
86.45
  • 86.45
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.90e3
  • 6.90e3
  • 2.01e4
76.91
  • 76.91
  • 32.78
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.11e3
  • 8.11e3
72.84
  • 72.84
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.06
  • 65.06
AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.12e4
  • 1.12e4
  • 1.16e4
  • 1.16e4
  • 1.18e4
  • 1.20e4
  • 1.25e4
  • 1.25e4
62.48
  • 62.48
  • 61.09
  • 61.09
  • 60.50
  • 59.98
  • 58.31
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.95
  • 60.95
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.23
  • 53.23
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.69
  • 51.69
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.32
  • 44.32
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.84
  • 37.84
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.39
  • 31.39
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC085574, BC164874, CU302206
EnsemblENSDARG00000045592 (tnni2a.1)
Uniprot/SPTREMBLQ5U3E9, Q5U3E9_DANRE
ZFINZDB-GENE-041114-60 (tnni2a.1)

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