D. rerio Gene: cax1 - ENSDARG00000045601 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045601
Namecax1
Descriptioncation/H+ exchanger protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3044]
OrganismDanio rerio (zebrafish)
Synonym(s)q156i9, si:dkey-180p18.2, si:dkey-180p18.2 {eco:0000313|embl:aai33107.1,gn eco:0000313|zfin:zdb-gene-030131-3044}, wu:fc25f10, zgc:136271
Orthologs(s)3 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
929
  • 929
  • 1.47e4
96.89
  • 96.89
  • 50.63
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.66e3
  • 1.66e3
94.44
  • 94.44
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.00e3
  • 2.00e3
93.30
  • 93.30
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
2.51e3
  • 2.51e3
  • 2.69e3
  • 4.62e3
  • 5.18e3
  • 6.58e3
91.58
  • 91.58
  • 91.01
  • 84.52
  • 82.66
  • 77.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.84e3
  • 2.84e3
90.49
  • 90.49
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.48e3
  • 3.48e3
88.34
  • 88.34
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.53e3
  • 4.53e3
84.85
  • 84.85
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.53e3
  • 4.53e3
84.85
  • 84.85
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.45e3
  • 5.45e3
81.77
  • 81.77
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000037Larval:Day 5
5.84e3
  • 5.84e3
  • 1.25e4
  • 1.36e4
  • 1.49e4
  • 1.50e4
  • 1.50e4
  • 1.51e4
  • 1.58e4
  • 1.78e4
  • 1.78e4
  • 1.83e4
80.46
  • 80.46
  • 58.03
  • 54.61
  • 50.20
  • 49.92
  • 49.90
  • 49.34
  • 46.95
  • 40.56
  • 40.43
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
6.01e3
  • 6.01e3
  • 8.01e3
  • 1.21e4
  • 1.30e4
  • 1.58e4
79.88
  • 79.88
  • 73.18
  • 59.46
  • 56.52
  • 47.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.38e3
  • 6.38e3
78.64
  • 78.64
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.37e3
  • 7.37e3
75.33
  • 75.33
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
7.69e3
  • 7.69e3
  • 8.60e3
  • 1.06e4
  • 1.26e4
  • 1.31e4
  • 1.36e4
  • 1.82e4
74.24
  • 74.24
  • 71.20
  • 64.49
  • 57.67
  • 55.97
  • 54.43
  • 39.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.91e3
  • 7.91e3
73.51
  • 73.51
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.42e3
  • 8.42e3
71.81
  • 71.81
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.09e3
  • 9.09e3
69.57
  • 69.57
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.13e4
  • 1.13e4
  • 1.17e4
62.28
  • 62.28
  • 60.81
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.25
  • 56.25
AEIR
  • AEIR
UBERON:0002342neural crest
  • ZFS:0000029Pharyngula:Prim-5
1.31e4
  • 1.31e4
56.24
  • 56.24
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.43e4
  • 1.43e4
  • 1.62e4
  • 1.66e4
52.18
  • 52.18
  • 45.80
  • 44.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
1.46e4
  • 1.46e4
51.13
  • 51.13
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.60
  • 32.60
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
27.45
  • 27.45
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.34e4
  • 2.34e4
21.79
  • 21.79
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi3 species3 genesCompare expression

Orthology information comes from OMA : ENSDARG00000045601.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000045601.

Cross-references

EnsemblENSDARG00000045601 (cax1)
ZFINZDB-GENE-030131-3044 (cax1)
EMBLBC133106, BX571796, DQ631793
Uniprot/SPTREMBLQ5RH62, Q5RH62_DANRE

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