D. rerio Gene: ifng1-1 - ENSDARG00000045671 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045671
Nameifng1-1
Descriptioninterferon, gamma 1-1 [Source:ZFIN;Acc:ZDB-GENE-060210-1]
OrganismDanio rerio (zebrafish)
Synonym(s)ifng1, ifng_1, ifngamma1, si:ch211-266a5.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
964
  • 964
96.78
  • 96.78
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.79e3
  • 8.79e3
70.57
  • 70.57
AEIR
  • AEIR
UBERON:0018549ventral wall of dorsal aorta
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.24e4
  • 1.24e4
  • 1.49e4
  • 1.49e4
58.33
  • 58.33
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.24
  • 46.24
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.41
  • 41.41
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.58
  • 34.58
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.63
  • 30.63
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.78
  • 29.78
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.25e4
  • 2.25e4
24.65
  • 24.65
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.36e4
  • 2.36e4
21.08
  • 21.08
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLAB194272, BX465210
EnsemblENSDARG00000045671 (ifng1-1)
Uniprot/SPTREMBLQ5TLE6, Q5TLE6_DANRE
ZFINZDB-GENE-060210-1 (ifng1-1)

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