D. rerio Gene: ppfibp1a - ENSDARG00000045749 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045749
Nameppfibp1a
DescriptionPTPRF interacting protein, binding protein 1a (liprin beta 1) [Source:ZFIN;Acc:ZDB-GENE-041210-298]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-207j16.2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.44e3
  • 1.44e3
95.18
  • 95.18
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.61e3
  • 1.61e3
94.60
  • 94.60
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.00e3
  • 2.00e3
  • 7.10e3
93.31
  • 93.31
  • 76.21
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
2.99e3
  • 2.99e3
  • 3.13e3
90.00
  • 90.00
  • 89.51
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.24e3
  • 4.24e3
85.79
  • 85.79
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.95e3
  • 4.95e3
83.42
  • 83.42
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
5.08e3
  • 5.08e3
  • 6.80e3
82.99
  • 82.99
  • 77.25
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
5.34e3
  • 5.34e3
  • 5.72e3
  • 7.12e3
  • 7.66e3
  • 8.37e3
82.14
  • 82.14
  • 80.85
  • 76.15
  • 74.35
  • 71.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.54e3
  • 5.54e3
81.44
  • 81.44
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.64e3
  • 5.64e3
81.12
  • 81.12
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.68e3
  • 6.68e3
77.64
  • 77.64
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.98e3
  • 6.98e3
  • 7.26e3
76.64
  • 76.64
  • 75.70
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.22e3
  • 8.22e3
72.47
  • 72.47
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.29e3
  • 8.29e3
72.25
  • 72.25
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.33e3
  • 8.33e3
72.10
  • 72.10
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.48e3
  • 8.48e3
71.62
  • 71.62
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.68e3
  • 8.68e3
70.95
  • 70.95
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.34e3
  • 9.34e3
68.73
  • 68.73
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
  • 1.37e4
64.26
  • 64.26
  • 54.03
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.07
  • 62.07
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.98
  • 58.98
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.37
  • 58.37
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.18
  • 56.18
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.75
  • 54.75
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

Do not show this banner again