D. rerio Gene: si:dkey-106n21.1 - ENSDARG00000045792 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045792
Namesi:dkey-106n21.1
Descriptionsi:dkey-106n21.1 [Source:ZFIN;Acc:ZDB-GENE-131120-167]
OrganismDanio rerio (zebrafish)
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.60e4
  • 1.60e4
  • 1.68e4
  • 1.71e4
  • 1.81e4
  • 2.05e4
46.30
  • 46.30
  • 43.85
  • 42.88
  • 39.48
  • 31.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.77
  • 45.77
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.66e4
  • 1.66e4
  • 2.12e4
44.52
  • 44.52
  • 28.91
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.11
  • 41.11
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
  • 2.32e4
38.02
  • 38.02
  • 22.45
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.54
  • 36.54
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.76
  • 34.76
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.27e4
  • 2.27e4
24.02
  • 24.02
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eumetazoa3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000045792.

Cross-references

EnsemblENSDARG00000045792 (si:dkey-106n21.1)
ZFINZDB-GENE-131120-167 (si:dkey-106n21.1)
EMBLBX323796
Uniprot/SPTREMBLF1R0M3, F1R0M3_DANRE, X1WGE4, X1WGE4_DANRE

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