D. rerio Gene: plekha5 - ENSDARG00000045870 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045870
Nameplekha5
Descriptionpleckstrin homology domain containing, family A member 5 [Source:ZFIN;Acc:ZDB-GENE-041210-25]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-239h19.1, wu:fb16e08

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
648
  • 648
  • 5.23e3
  • 7.85e3
  • 1.06e4
97.83
  • 97.83
  • 82.49
  • 73.72
  • 64.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.64e3
  • 2.64e3
91.16
  • 91.16
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.93e3
  • 2.93e3
  • 1.04e4
90.21
  • 90.21
  • 65.29
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.19e3
  • 3.19e3
89.34
  • 89.34
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
3.61e3
  • 3.61e3
  • 4.70e3
  • 5.70e3
  • 6.27e3
  • 8.21e3
  • 1.12e4
  • 1.13e4
  • 1.15e4
  • 1.16e4
  • 1.17e4
87.93
  • 87.93
  • 84.25
  • 80.91
  • 78.99
  • 72.50
  • 62.64
  • 62.14
  • 61.45
  • 61.32
  • 60.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.36e3
  • 4.36e3
85.39
  • 85.39
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000104life cycle
4.42e3
  • 4.42e3
  • 6.23e3
  • 7.03e3
  • 7.26e3
  • 8.18e3
  • 8.28e3
  • 8.31e3
  • 8.34e3
  • 8.41e3
  • 8.66e3
  • 8.79e3
  • 9.35e3
  • 9.85e3
  • 1.18e4
  • 1.50e4
85.21
  • 85.21
  • 79.14
  • 76.45
  • 75.68
  • 72.63
  • 72.28
  • 72.16
  • 72.07
  • 71.84
  • 71.01
  • 70.59
  • 68.70
  • 67.01
  • 60.59
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.56e3
  • 4.56e3
84.74
  • 84.74
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
4.64e3
  • 4.64e3
  • 5.26e3
  • 6.41e3
  • 1.07e4
  • 1.07e4
84.48
  • 84.48
  • 82.38
  • 78.54
  • 64.33
  • 64.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.19e3
  • 5.19e3
82.63
  • 82.63
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.41e3
  • 5.41e3
  • 7.08e3
81.87
  • 81.87
  • 76.29
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.45e3
  • 5.45e3
81.74
  • 81.74
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
5.46e3
  • 5.46e3
  • 5.66e3
  • 8.00e3
81.73
  • 81.73
  • 81.05
  • 73.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
5.62e3
  • 5.62e3
  • 7.54e3
  • 7.62e3
  • 7.67e3
  • 8.82e3
  • 9.80e3
81.19
  • 81.19
  • 74.77
  • 74.50
  • 74.33
  • 70.47
  • 67.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.07e3
  • 6.07e3
  • 1.07e4
79.69
  • 79.69
  • 64.07
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.26e3
  • 6.26e3
79.04
  • 79.04
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.67e3
  • 7.67e3
74.31
  • 74.31
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.88e3
  • 7.88e3
73.63
  • 73.63
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.01e3
  • 8.01e3
73.19
  • 73.19
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.68e3
  • 9.68e3
67.58
  • 67.58
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.80e3
  • 9.80e3
67.17
  • 67.17
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.03e4
  • 1.03e4
65.51
  • 65.51
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.77
  • 62.77
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.07
  • 60.07
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.27e4
  • 1.27e4
57.46
  • 57.46
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.92
  • 56.92
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.25
  • 51.25
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.53
  • 50.53
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.37
  • 39.37
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

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