D. rerio Gene: dynlt1 - ENSDARG00000045909 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045909
Namedynlt1
Descriptiondynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-222h17.6, si:ch211-51e12.3
Orthologs(s)26 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
249
  • 249
99.17
  • 99.17
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
2.86e3
  • 2.86e3
  • 6.13e3
  • 8.02e3
  • 8.19e3
  • 8.97e3
90.41
  • 90.41
  • 79.47
  • 73.14
  • 72.56
  • 69.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.42e3
  • 3.42e3
88.54
  • 88.54
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.53e3
  • 3.53e3
88.17
  • 88.17
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
3.99e3
  • 3.99e3
86.64
  • 86.64
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.06e3
  • 4.06e3
  • 6.55e3
86.40
  • 86.40
  • 78.06
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.06e3
  • 5.06e3
83.07
  • 83.07
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.36e3
  • 5.36e3
82.05
  • 82.05
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.48e3
  • 5.48e3
81.66
  • 81.66
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.92e3
  • 5.92e3
80.19
  • 80.19
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.48e3
  • 6.48e3
78.30
  • 78.30
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.86e3
  • 6.86e3
77.03
  • 77.03
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.40e3
  • 7.40e3
  • 1.06e4
75.23
  • 75.23
  • 64.59
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.92e3
  • 7.92e3
73.50
  • 73.50
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.91e3
  • 8.91e3
  • 1.12e4
70.17
  • 70.17
  • 62.60
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.00e3
  • 9.00e3
69.86
  • 69.86
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.07e3
  • 9.07e3
69.61
  • 69.61
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.77
  • 65.77
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.08e4
  • 1.08e4
  • 1.41e4
63.83
  • 63.83
  • 52.78
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.20
  • 59.20
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.55
  • 55.55
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.67
  • 54.67
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.39e4
  • 1.39e4
  • 1.71e4
53.49
  • 53.49
  • 42.87
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.55e4
  • 1.55e4
48.20
  • 48.20
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.65
  • 44.65
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi15 species19 genesCompare expression
Bilateria22 species26 genesCompare expression

Orthology information comes from OMA : ENSDARG00000045909.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression
Opisthokonta2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000045909.

Cross-references

EnsemblENSDARG00000045909 (dynlt1)
ZFINZDB-GENE-041210-9 (dynlt1)
EMBLBX890562
Uniprot/SPTREMBLF1Q5L5, F1Q5L5_DANRE, F1R831, F1R831_DANRE

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