D. rerio Gene: PTGDS (1 to many) - ENSDARG00000045979 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045979
NamePTGDS (1 to many)
Descriptionzgc:153704 [Source:ZFIN;Acc:ZDB-GENE-060929-1114]
OrganismDanio rerio (zebrafish)
Synonym(s)l-pgds, pgds

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
612
  • 612
  • 1.48e4
97.95
  • 97.95
  • 50.28
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.02e3
  • 1.02e3
  • 1.21e3
96.60
  • 96.60
  • 95.94
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.28e3
  • 1.28e3
  • 1.35e4
  • 2.28e4
  • 2.34e4
  • 2.66e4
95.70
  • 95.70
  • 54.75
  • 23.82
  • 21.69
  • 10.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.64e3
  • 1.64e3
94.53
  • 94.53
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.69e3
  • 2.69e3
90.99
  • 90.99
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
  • 1.11e4
63.67
  • 63.67
  • 62.96
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.56
  • 40.56
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.82e4
  • 1.82e4
39.13
  • 39.13
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.58
  • 37.58
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
35.88
  • 35.88
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.55
  • 34.55
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.25e4
  • 2.25e4
24.64
  • 24.64
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000045979 (PTGDS (1 to many))
HGNCHGNC:9592 (PTGDS (1 to many))
Uniprot/SPTREMBLQ0D282, Q0D282_DANRE
ZFINZDB-GENE-060929-1114 (zgc:153704)

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