D. rerio Gene: arf4a - ENSDARG00000045989 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000045989
Namearf4a
DescriptionADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:101030, zgc:174360

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
3.10e3
  • 3.10e3
  • 5.76e3
89.61
  • 89.61
  • 80.71
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.20e3
  • 3.20e3
89.29
  • 89.29
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.47e3
  • 3.47e3
88.39
  • 88.39
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
3.54e3
  • 3.54e3
  • 3.77e3
  • 5.65e3
  • 6.10e3
  • 1.05e4
88.13
  • 88.13
  • 87.37
  • 81.08
  • 79.56
  • 64.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.56e3
  • 3.56e3
88.08
  • 88.08
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.09e3
  • 4.09e3
86.31
  • 86.31
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
4.52e3
  • 4.52e3
  • 8.31e3
84.85
  • 84.85
  • 72.18
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.79e3
  • 4.79e3
83.97
  • 83.97
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.07e3
  • 5.07e3
  • 5.10e3
83.03
  • 83.03
  • 82.94
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.36e3
  • 5.36e3
82.04
  • 82.04
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.39e3
  • 5.39e3
81.97
  • 81.97
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.70e3
  • 5.70e3
80.92
  • 80.92
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.08e3
  • 6.08e3
79.64
  • 79.64
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.83e3
  • 6.83e3
77.13
  • 77.13
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.84e3
  • 6.84e3
77.10
  • 77.10
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.16e3
  • 7.16e3
76.02
  • 76.02
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.52e3
  • 7.52e3
  • 1.11e4
74.83
  • 74.83
  • 62.80
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.34e3
  • 8.34e3
72.08
  • 72.08
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
8.48e3
  • 8.48e3
  • 1.04e4
71.60
  • 71.60
  • 65.20
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.37e3
  • 9.37e3
68.64
  • 68.64
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.92
  • 65.92
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.79
  • 65.79
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.36
  • 60.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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