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D. rerio Gene: kcna6a - ENSDARG00000046014 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000046014
Namekcna6a
Descriptionpotassium voltage-gated channel, shaker-related, subfamily, member 6 a [Source:ZFIN;Acc:ZDB-GENE-080722-21]
OrganismDanio rerio (zebrafish)
Synonym(s)kcna6, kcna6 {eco:0000313|ensembl:ensdarp00000067647,gn eco:0000313|zfin:zdb-gene-080722-21}, si:ch73-230f23.2, zgc:194413, zgc:194437, zgc:194437gn
Orthologs(s)1 orthologs
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.09e3
  • 3.09e3
89.65
  • 89.65
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
86.19
  • 86.19
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.68
  • 62.68
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.61e4
  • 1.61e4
  • 2.02e4
46.07
  • 46.07
  • 32.37
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.61e4
  • 1.61e4
  • 2.32e4
45.96
  • 45.96
  • 22.38
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.31
  • 45.31
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.35
  • 41.35
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.26
  • 30.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000046014.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata5 genesCompare expression
Eumetazoa10 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000046014.

Cross-references

EnsemblENSDARG00000046014 (kcna6a)
ZFINZDB-GENE-080722-21 (kcna6a)
EMBLBC162977, BC162997, CU929369
Uniprot/SPTREMBLB3DI29, B3DI29_DANRE

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