D. rerio Gene: zgc:110339 - ENSDARG00000046030 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000046030
Namezgc:110339
Descriptionzgc:110339 [Source:ZFIN;Acc:ZDB-GENE-050417-323]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
460
  • 460
98.46
  • 98.46
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
485
  • 485
98.38
  • 98.38
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
694
  • 694
97.68
  • 97.68
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
762
  • 762
97.45
  • 97.45
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
765
  • 765
97.44
  • 97.44
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
817
  • 817
97.27
  • 97.27
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.15e3
  • 1.15e3
96.14
  • 96.14
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
1.21e3
  • 1.21e3
  • 1.32e3
  • 1.83e3
  • 2.09e3
  • 2.30e3
  • 3.32e3
95.96
  • 95.96
  • 95.59
  • 93.89
  • 93.00
  • 92.31
  • 88.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • ZFS:0000049segmentation
  • UBERON:0000066fully formed stage
  • UBERON:0000109gastrula stage
1.29e3
  • 1.29e3
  • 1.44e3
  • 1.55e3
  • 1.60e3
  • 2.42e3
  • 2.72e3
  • 2.73e3
  • 2.99e3
  • 3.08e3
  • 3.10e3
  • 3.33e3
  • 3.43e3
  • 4.03e3
  • 6.59e3
  • 1.38e4
  • 1.39e4
  • 1.45e4
  • 1.47e4
  • 1.49e4
95.70
  • 95.70
  • 95.18
  • 94.81
  • 94.65
  • 91.88
  • 90.90
  • 90.87
  • 90.00
  • 89.70
  • 89.62
  • 88.84
  • 88.53
  • 86.51
  • 77.94
  • 53.85
  • 53.44
  • 51.51
  • 50.68
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.34e3
  • 1.34e3
  • 1.40e3
95.52
  • 95.52
  • 95.33
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.35e3
  • 1.35e3
95.49
  • 95.49
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.49e3
  • 1.49e3
  • 1.58e3
  • 2.28e3
95.01
  • 95.01
  • 94.70
  • 92.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
1.54e3
  • 1.54e3
  • 1.57e3
  • 1.60e3
  • 1.96e3
  • 1.98e3
  • 2.03e3
  • 2.04e3
  • 3.08e3
  • 4.52e3
  • 4.85e3
94.84
  • 94.84
  • 94.75
  • 94.64
  • 93.45
  • 93.37
  • 93.20
  • 93.17
  • 89.67
  • 84.87
  • 83.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.56e3
  • 1.56e3
94.77
  • 94.77
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.59e3
  • 1.59e3
  • 2.68e3
94.67
  • 94.67
  • 91.04
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.68e3
  • 1.68e3
94.38
  • 94.38
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.73e3
  • 1.73e3
94.21
  • 94.21
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.77e3
  • 1.77e3
  • 5.97e3
94.07
  • 94.07
  • 80.03
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.94e3
  • 1.94e3
93.52
  • 93.52
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.59e3
  • 2.59e3
91.33
  • 91.33
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
2.61e3
  • 2.61e3
  • 2.80e3
  • 3.64e3
  • 3.86e3
  • 4.04e3
91.26
  • 91.26
  • 90.64
  • 87.81
  • 87.09
  • 86.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.70e3
  • 2.70e3
90.98
  • 90.98
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.74e3
  • 2.74e3
90.84
  • 90.84
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.82e3
  • 2.82e3
  • 1.50e4
90.57
  • 90.57
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
2.96e3
  • 2.96e3
  • 8.14e3
90.08
  • 90.08
  • 72.76
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
3.18e3
  • 3.18e3
  • 3.54e3
  • 5.44e3
89.35
  • 89.35
  • 88.14
  • 81.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.18e3
  • 4.18e3
86.01
  • 86.01
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.94e3
  • 4.94e3
83.46
  • 83.46
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.90e3
  • 5.90e3
80.26
  • 80.26
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.06e3
  • 6.06e3
79.71
  • 79.71
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.35e3
  • 6.35e3
78.74
  • 78.74
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.30e4
  • 1.30e4
56.48
  • 56.48
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
54.59
  • 54.59
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.90
  • 47.90
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCR391967
EnsemblENSDARG00000046030 (zgc:110339)
Uniprot/SPTREMBLF1RAM4, F1RAM4_DANRE
ZFINZDB-GENE-050417-323 (zgc:110339)

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