D. rerio Gene: zgc:77838 - ENSDARG00000046071 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000046071
Namezgc:77838
Descriptionzgc:77838 [Source:ZFIN;Acc:ZDB-GENE-040426-1889]
OrganismDanio rerio (zebrafish)
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.39e3
  • 1.39e3
  • 2.29e3
95.34
  • 95.34
  • 92.34
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.79e3
  • 1.79e3
94.01
  • 94.01
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.83e3
  • 1.83e3
  • 1.50e4
93.87
  • 93.87
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.99e3
  • 1.99e3
  • 3.20e3
93.34
  • 93.34
  • 89.28
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.17e3
  • 2.17e3
  • 1.35e4
92.74
  • 92.74
  • 54.73
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
3.11e3
  • 3.11e3
  • 3.60e3
  • 4.16e3
  • 4.72e3
  • 7.00e3
89.58
  • 89.58
  • 87.95
  • 86.07
  • 84.20
  • 76.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
3.12e3
  • 3.12e3
  • 6.54e3
89.56
  • 89.56
  • 78.09
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.13e3
  • 3.13e3
89.53
  • 89.53
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.24e3
  • 3.24e3
  • 1.13e4
89.14
  • 89.14
  • 62.05
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.25e3
  • 3.25e3
89.11
  • 89.11
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.45e3
  • 3.45e3
88.44
  • 88.44
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.67e3
  • 3.67e3
87.73
  • 87.73
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.80e3
  • 3.80e3
87.28
  • 87.28
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.81e3
  • 3.81e3
87.26
  • 87.26
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.02e3
  • 4.02e3
86.54
  • 86.54
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.10e3
  • 4.10e3
86.28
  • 86.28
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.12e3
  • 4.12e3
86.20
  • 86.20
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.79e3
  • 4.79e3
  • 5.41e3
83.97
  • 83.97
  • 81.90
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.23e3
  • 5.23e3
82.49
  • 82.49
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.23e3
  • 6.23e3
79.15
  • 79.15
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.29e3
  • 6.29e3
78.95
  • 78.95
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.92e3
  • 6.92e3
76.84
  • 76.84
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.15e3
  • 7.15e3
76.08
  • 76.08
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.73e3
  • 7.73e3
74.12
  • 74.12
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.80e3
  • 7.80e3
73.88
  • 73.88
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.05e3
  • 8.05e3
73.05
  • 73.05
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000046071 (zgc:77838)
ZFINZDB-GENE-040426-1889 (zgc:77838)
EMBLBC065458, CU466271, CU466288
Uniprot/SPTREMBLF1QEA0, F1QEA0_DANRE, F1RB86, F1RB86_DANRE, Q6P0T1, Q6P0T1_DANRE

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