D. rerio Gene: stk11 - ENSDARG00000046074 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000046074
Namestk11
Descriptionserine/threonine kinase 11 [Source:ZFIN;Acc:ZDB-GENE-050417-383]
OrganismDanio rerio (zebrafish)
Synonym(s)lkb1, wu:fj61a05, zgc:110180
Orthologs(s)14 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.46e3
  • 2.46e3
91.75
  • 91.75
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:00072334 cell stage
  • ZFS:0000028Segmentation:26+ somites
  • UBERON:00072322 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0004707pharyngula stage
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
2.72e3
  • 2.72e3
  • 3.56e3
  • 4.07e3
  • 4.07e3
  • 4.07e3
  • 4.07e3
  • 4.07e3
  • 4.07e3
  • 4.07e3
  • 4.07e3
  • 4.07e3
  • 4.07e3
  • 4.67e3
  • 4.98e3
  • 4.98e3
  • 4.98e3
  • 4.98e3
  • 5.27e3
  • 5.98e3
  • 6.15e3
  • 6.66e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.92e3
  • 6.97e3
  • 7.13e3
  • 7.24e3
  • 7.80e3
  • 8.07e3
  • 8.22e3
  • 8.71e3
  • 8.94e3
  • 9.35e3
  • 9.49e3
  • 1.02e4
  • 1.03e4
  • 1.44e4
  • 1.49e4
  • 1.50e4
90.91
  • 90.91
  • 88.09
  • 86.36
  • 86.36
  • 86.36
  • 86.36
  • 86.36
  • 86.36
  • 86.36
  • 86.36
  • 86.36
  • 86.36
  • 84.37
  • 83.33
  • 83.33
  • 83.33
  • 83.33
  • 82.35
  • 79.99
  • 79.40
  • 77.72
  • 77.27
  • 77.27
  • 77.26
  • 76.83
  • 76.66
  • 76.12
  • 75.76
  • 73.87
  • 72.99
  • 72.48
  • 70.85
  • 70.06
  • 68.70
  • 68.23
  • 66.00
  • 65.51
  • 51.88
  • 50.25
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.12e3
  • 3.12e3
89.56
  • 89.56
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.42e3
  • 3.42e3
88.55
  • 88.55
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.45e3
  • 3.45e3
88.44
  • 88.44
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.55e3
  • 3.55e3
88.12
  • 88.12
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
3.58e3
  • 3.58e3
  • 7.47e3
  • 7.95e3
  • 9.96e3
  • 1.12e4
  • 1.12e4
88.02
  • 88.02
  • 75.00
  • 73.39
  • 66.67
  • 62.50
  • 62.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.66e3
  • 3.66e3
87.75
  • 87.75
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.92e3
  • 3.92e3
86.86
  • 86.86
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.14e3
  • 4.14e3
86.13
  • 86.13
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.30e3
  • 4.30e3
85.60
  • 85.60
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.42e3
  • 4.42e3
  • 8.09e3
85.20
  • 85.20
  • 72.90
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
4.45e3
  • 4.45e3
  • 4.73e3
  • 5.35e3
  • 5.76e3
  • 7.54e3
  • 8.22e3
  • 8.86e3
  • 8.89e3
  • 9.55e3
  • 1.16e4
85.11
  • 85.11
  • 84.16
  • 82.10
  • 80.70
  • 74.77
  • 72.49
  • 70.32
  • 70.23
  • 68.03
  • 61.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
4.51e3
  • 4.51e3
  • 4.53e3
  • 5.39e3
  • 6.84e3
  • 8.79e3
  • 8.79e3
84.90
  • 84.90
  • 84.83
  • 81.97
  • 77.10
  • 70.58
  • 70.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.32e3
  • 5.32e3
82.18
  • 82.18
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.53e3
  • 5.53e3
81.50
  • 81.50
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
5.67e3
  • 5.67e3
  • 7.89e3
  • 1.01e4
81.03
  • 81.03
  • 73.58
  • 66.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.77e3
  • 5.77e3
80.68
  • 80.68
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
6.61e3
  • 6.61e3
  • 1.02e4
77.88
  • 77.88
  • 65.79
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
6.64e3
  • 6.64e3
  • 6.79e3
  • 7.16e3
  • 7.68e3
  • 8.31e3
77.78
  • 77.78
  • 77.28
  • 76.04
  • 74.30
  • 72.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.74e3
  • 6.74e3
77.43
  • 77.43
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.13e3
  • 7.13e3
76.13
  • 76.13
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
7.70e3
  • 7.70e3
  • 1.12e4
  • 1.28e4
  • 1.31e4
74.22
  • 74.22
  • 62.48
  • 57.13
  • 56.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.05e3
  • 8.05e3
73.04
  • 73.04
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
8.63e3
  • 8.63e3
  • 9.96e3
  • 1.12e4
  • 1.24e4
71.10
  • 71.10
  • 66.67
  • 62.50
  • 58.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.80e3
  • 8.80e3
70.54
  • 70.54
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.23e3
  • 9.23e3
69.11
  • 69.11
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.28e3
  • 9.28e3
  • 9.41e3
  • 1.12e4
  • 1.14e4
68.94
  • 68.94
  • 68.49
  • 62.36
  • 61.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.97e3
  • 9.97e3
  • 1.03e4
66.61
  • 66.61
  • 65.65
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.78
  • 64.78
AEIR
  • AEIR
UBERON:0002100trunk
  • ZFS:0000029Pharyngula:Prim-5
1.07e4
  • 1.07e4
64.28
  • 64.28
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.15e4
  • 1.15e4
61.33
  • 61.33
AEIR
  • AEIR
UBERON:0001264pancreas
  • ZFS:0000037Larval:Day 5
1.16e4
  • 1.16e4
61.10
  • 61.10
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.89
  • 57.89
AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000033Hatching:Long-pec
1.31e4
  • 1.31e4
56.23
  • 56.23
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.57
  • 39.57
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000046074.

Cross-references

EnsemblENSDARG00000046074 (stk11)
ZFINZDB-GENE-050417-383 (stk11)
EMBLCU693441, CU914601
Uniprot/SPTREMBLF1R050, F1R050_DANRE

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