D. rerio Gene: cacng6b - ENSDARG00000046079 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000046079
Namecacng6b
Descriptioncalcium channel, voltage-dependent, gamma subunit 6b [Source:ZFIN;Acc:ZDB-GENE-100922-272]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-38o19.9
Orthologs(s)12 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.09e3
  • 1.09e3
96.36
  • 96.36
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.15e3
  • 2.15e3
92.81
  • 92.81
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.54e3
  • 5.54e3
81.45
  • 81.45
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
6.80e3
  • 6.80e3
  • 7.91e3
77.22
  • 77.22
  • 73.50
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
8.33e3
  • 8.33e3
  • 1.03e4
  • 1.12e4
  • 1.39e4
  • 1.56e4
72.12
  • 72.12
  • 65.51
  • 62.39
  • 53.55
  • 47.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
9.83e3
  • 9.83e3
  • 1.59e4
67.09
  • 67.09
  • 46.66
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.57
  • 53.57
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.30
  • 50.30
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.69
  • 49.69
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.75e4
  • 1.75e4
41.47
  • 41.47
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.69
  • 39.69
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.87
  • 34.87
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
25.22
  • 25.22
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
25.16
  • 25.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000046079.

Cross-references

EnsemblENSDARG00000046079 (cacng6b)
ZFINZDB-GENE-100922-272 (cacng6b)
EMBLCR848818
Uniprot/SPTREMBLE7F9M5, E7F9M5_DANRE

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