D. rerio Gene: si:ch211-170d8.5 - ENSDARG00000046142 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000046142
Namesi:ch211-170d8.5
Descriptionsi:ch211-170d8.5 [Source:ZFIN;Acc:ZDB-GENE-081105-120]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
398
  • 398
98.67
  • 98.67
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.32e3
  • 2.32e3
92.24
  • 92.24
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.99e3
  • 4.99e3
83.28
  • 83.28
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.67e3
  • 5.67e3
81.00
  • 81.00
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.80e3
  • 5.80e3
80.58
  • 80.58
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
9.64e3
  • 9.64e3
  • 1.95e4
67.73
  • 67.73
  • 34.78
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.01e4
  • 1.01e4
  • 2.69e4
66.30
  • 66.30
  • 9.78
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
1.07e4
  • 1.07e4
64.13
  • 64.13
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.32
  • 62.32
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.22
  • 41.22
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.35
  • 35.35
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
35.02
  • 35.02
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
2.00e4
  • 2.00e4
  • 2.38e4
33.08
  • 33.08
  • 20.38
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.82
  • 27.82
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCT027598
EnsemblENSDARG00000046142 (si:ch211-170d8.5)
Uniprot/SPTREMBLA9C459, A9C459_DANRE, A9C460, A9C460_DANRE, A9C461, A9C461_DANRE
ZFINZDB-GENE-081105-120 (si:ch211-170d8.5)

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