D. rerio Gene: tnfaip8l2b - ENSDARG00000046148 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000046148
Nametnfaip8l2b
Descriptiontumor necrosis factor, alpha-induced protein 8-like 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1359]
OrganismDanio rerio (zebrafish)
Synonym(s)tipe2 b, tnfaip8l, tnfaip8l2, tnfaip8l2a, zgc:64074
Orthologs(s)18 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
2.29e3
  • 2.29e3
  • 4.52e3
92.32
  • 92.32
  • 84.86
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.75e3
  • 2.75e3
90.79
  • 90.79
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.85e3
  • 2.85e3
90.45
  • 90.45
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.93e3
  • 2.93e3
90.20
  • 90.20
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.19e3
  • 6.19e3
79.29
  • 79.29
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
6.39e3
  • 6.39e3
78.60
  • 78.60
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
6.89e3
  • 6.89e3
  • 7.63e3
76.94
  • 76.94
  • 74.45
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
6.90e3
  • 6.90e3
  • 6.93e3
  • 7.79e3
  • 9.54e3
  • 1.05e4
76.89
  • 76.89
  • 76.81
  • 73.90
  • 68.07
  • 64.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.48e3
  • 7.48e3
74.95
  • 74.95
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
9.95e3
  • 9.95e3
  • 1.28e4
66.69
  • 66.69
  • 57.23
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.97
  • 65.97
AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
1.05e4
  • 1.05e4
  • 1.05e4
  • 1.10e4
  • 1.10e4
  • 1.10e4
  • 1.12e4
  • 1.14e4
  • 1.14e4
  • 1.20e4
  • 1.23e4
  • 1.26e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
64.69
  • 64.69
  • 64.69
  • 63.32
  • 63.32
  • 63.32
  • 62.48
  • 61.75
  • 61.75
  • 59.98
  • 58.80
  • 57.68
  • 57.13
  • 57.13
  • 57.13
  • 57.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.16
  • 64.16
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
1.08e4
  • 1.08e4
  • 1.08e4
  • 1.10e4
  • 1.12e4
  • 1.14e4
  • 1.17e4
  • 1.20e4
  • 1.28e4
63.87
  • 63.87
  • 63.87
  • 63.32
  • 62.48
  • 61.75
  • 60.70
  • 59.98
  • 57.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
1.14e4
  • 1.14e4
  • 1.15e4
  • 1.17e4
  • 1.20e4
61.88
  • 61.88
  • 61.34
  • 60.84
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
58.99
  • 58.99
AEIR
  • AEIR
UBERON:0004128optic vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.23e4
  • 1.23e4
  • 1.23e4
  • 1.23e4
58.80
  • 58.80
  • 58.80
  • 58.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.60
  • 57.60
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.48
  • 57.48
AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000026Segmentation:14-19 somites
1.33e4
  • 1.33e4
55.53
  • 55.53
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.02
  • 53.02
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.41
  • 49.41
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
  • 1.59e4
48.32
  • 48.32
  • 46.91
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.59
  • 47.59
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.35
  • 38.35
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.03e4
  • 2.03e4
31.94
  • 31.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Clupeocephala1 geneCompare expression
Eumetazoa3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000046148.

Cross-references

EnsemblENSDARG00000046148 (tnfaip8l2b)
ZFINZDB-GENE-040426-1359 (tnfaip8l2b)
EMBLBC053238
Uniprot/SWISSPROTQ7T364, TPL2B_DANRE

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