D. rerio Gene: si:ch211-113a14.24 - ENSDARG00000051718 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000051718
Namesi:ch211-113a14.24
Descriptionsi:ch211-113a14.24 [Source:ZFIN;Acc:ZDB-GENE-121214-122]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.41e3
  • 3.41e3
88.58
  • 88.58
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.28e4
  • 1.28e4
  • 1.45e4
57.15
  • 57.15
  • 51.49
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.30e4
  • 1.30e4
  • 1.46e4
56.45
  • 56.45
  • 50.99
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.45e4
  • 1.45e4
  • 2.24e4
51.50
  • 51.50
  • 25.15
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.63e4
  • 1.63e4
  • 1.92e4
  • 2.27e4
  • 2.77e4
45.27
  • 45.27
  • 35.79
  • 24.12
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.15e4
  • 2.15e4
28.08
  • 28.08
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCR354435
EnsemblENSDARG00000051718 (si:ch211-113a14.24)
Uniprot/SPTREMBLE7FAK0, E7FAK0_DANRE
ZFINZDB-GENE-121214-122 (si:ch211-113a14.24)

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