D. rerio Gene: si:ch211-113a14.16 - ENSDARG00000051734 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000051734
Namesi:ch211-113a14.16
Descriptionsi:ch211-113a14.16 [Source:ZFIN;Acc:ZDB-GENE-121214-150]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
775
  • 775
97.41
  • 97.41
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
9.09e3
  • 9.09e3
  • 9.25e3
69.56
  • 69.56
  • 69.01
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
9.55e3
  • 9.55e3
  • 1.23e4
68.02
  • 68.02
  • 58.81
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.86
  • 60.86
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.29e4
  • 1.29e4
  • 1.97e4
56.92
  • 56.92
  • 34.04
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.30e4
  • 1.30e4
56.36
  • 56.36
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
1.38e4
  • 1.38e4
  • 1.49e4
  • 1.66e4
  • 2.06e4
53.65
  • 53.65
  • 50.15
  • 44.32
  • 30.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.44e4
  • 1.44e4
51.72
  • 51.72
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.10
  • 44.10
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.82e4
  • 1.82e4
39.16
  • 39.16
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
39.04
  • 39.04
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.62
  • 32.62
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.64e4
  • 2.64e4
11.62
  • 11.62
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.73e4
  • 2.73e4
8.46
  • 8.46
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCR354435
EnsemblENSDARG00000051734 (si:ch211-113a14.16)
Uniprot/SPTREMBLE7FE07, E7FE07_DANRE
ZFINZDB-GENE-121214-150 (si:ch211-113a14.16)

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