D. rerio Gene: zgc:173552 - ENSDARG00000051737 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000051737
Namezgc:173552
Descriptionzgc:173552 [Source:ZFIN;Acc:ZDB-GENE-080220-24]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-113a14.14,gn si:ch211-113a14.23,gn si:ch211-113a14.27

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.07e4
  • 1.07e4
  • 1.09e4
64.25
  • 64.25
  • 63.63
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.19e4
  • 1.19e4
60.11
  • 60.11
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.22e4
  • 1.22e4
  • 1.54e4
59.16
  • 59.16
  • 48.28
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.32e4
  • 1.32e4
55.75
  • 55.75
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.61
  • 55.61
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.75e4
  • 1.75e4
  • 1.99e4
41.41
  • 41.41
  • 33.53
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
1.75e4
  • 1.75e4
  • 1.78e4
  • 2.40e4
  • 2.77e4
41.36
  • 41.36
  • 40.37
  • 19.58
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.13
  • 41.13
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.77
  • 29.77
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
2.11e4
  • 2.11e4
29.50
  • 29.50
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.26e4
  • 2.26e4
24.31
  • 24.31
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.55e4
  • 2.55e4
14.66
  • 14.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC154136, CR354435, FP236812
EnsemblENSDARG00000051737 (zgc:173552)
Uniprot/SPTREMBLA8KBJ5, A8KBJ5_DANRE
ZFINZDB-GENE-080220-24 (zgc:173552)

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