D. rerio Gene: ccnd2a - ENSDARG00000051748 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000051748
Nameccnd2a
Descriptioncyclin D2, a [Source:ZFIN;Acc:ZDB-GENE-070424-30]
OrganismDanio rerio (zebrafish)
Synonym(s)ccnd2, zgc:162280
Orthologs(s)16 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.41e3
  • 1.41e3
95.27
  • 95.27
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.52e3
  • 1.52e3
94.92
  • 94.92
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.78e3
  • 1.78e3
  • 8.33e3
94.03
  • 94.03
  • 72.12
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.09e3
  • 2.09e3
93.01
  • 93.01
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.23e3
  • 2.23e3
  • 3.48e3
92.53
  • 92.53
  • 88.36
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
2.84e3
  • 2.84e3
  • 3.37e3
  • 4.10e3
  • 5.21e3
  • 5.40e3
90.48
  • 90.48
  • 88.72
  • 86.28
  • 82.57
  • 81.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.91e3
  • 2.91e3
90.26
  • 90.26
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.05e3
  • 3.05e3
89.78
  • 89.78
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.38e3
  • 3.38e3
88.68
  • 88.68
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
3.82e3
  • 3.82e3
  • 4.59e3
87.23
  • 87.23
  • 84.65
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.24e3
  • 4.24e3
85.82
  • 85.82
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.29e3
  • 4.29e3
85.64
  • 85.64
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.60e3
  • 4.60e3
84.59
  • 84.59
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.62e3
  • 4.62e3
84.53
  • 84.53
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.81e3
  • 4.81e3
83.88
  • 83.88
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.94e3
  • 6.94e3
76.76
  • 76.76
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
7.88e3
  • 7.88e3
  • 9.36e3
73.60
  • 73.60
  • 68.65
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.24e3
  • 8.24e3
72.40
  • 72.40
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.61e3
  • 8.61e3
71.17
  • 71.17
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.77e3
  • 8.77e3
70.65
  • 70.65
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.08e3
  • 9.08e3
69.58
  • 69.58
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
9.25e3
  • 9.25e3
  • 9.78e3
69.02
  • 69.02
  • 67.25
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.89e3
  • 9.89e3
66.88
  • 66.88
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.37
  • 65.37
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.21e4
  • 1.21e4
59.47
  • 59.47
AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000029Pharyngula:Prim-5
1.33e4
  • 1.33e4
55.53
  • 55.53
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000051748.

Cross-references

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