D. rerio Gene: smu1b - ENSDARG00000051970 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000051970
Namesmu1b
Descriptionsmu-1 suppressor of mec-8 and unc-52 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-130530-635]
OrganismDanio rerio (zebrafish)
Synonym(s)zmp:0000000632

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
3.31e3
  • 3.31e3
88.92
  • 88.92
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.10e4
  • 1.10e4
63.27
  • 63.27
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.08
  • 61.08
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.22e4
  • 1.22e4
  • 1.26e4
59.01
  • 59.01
  • 57.71
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.31e4
  • 1.31e4
56.30
  • 56.30
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.35e4
  • 1.35e4
  • 2.19e4
54.70
  • 54.70
  • 26.58
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.40e4
  • 1.40e4
  • 2.11e4
  • 2.14e4
  • 2.23e4
52.97
  • 52.97
  • 29.27
  • 28.22
  • 25.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.45e4
  • 1.45e4
  • 1.69e4
51.57
  • 51.57
  • 43.57
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.23
  • 44.23
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.02
  • 44.02
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.67
  • 41.67
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.46
  • 41.46
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.20
  • 38.20
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.85
  • 37.85
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.86e4
  • 1.86e4
37.61
  • 37.61
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
36.17
  • 36.17
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.43
  • 32.43
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.11e4
  • 2.11e4
29.21
  • 29.21
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.29e4
  • 2.29e4
23.32
  • 23.32
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCU929294
EnsemblENSDARG00000051970 (smu1b)
Uniprot/SPTREMBLE7FFQ0, E7FFQ0_DANRE
ZFINZDB-GENE-130530-635 (smu1b)

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