D. rerio Gene: cabp2a - ENSDARG00000052016 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000052016
Namecabp2a
Descriptioncalcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:112300
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
175
  • 175
  • 1.50e4
99.42
  • 99.42
  • 49.93
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.88e3
  • 1.88e3
  • 3.61e3
93.71
  • 93.71
  • 87.90
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
4.27e3
  • 4.27e3
  • 1.68e4
  • 1.80e4
  • 2.02e4
  • 2.19e4
85.70
  • 85.70
  • 43.81
  • 39.68
  • 32.39
  • 26.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000037Larval:Day 5
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0001791inner nuclear layer of retina
  • ZFS:0000037Larval:Day 5
1.16e4
  • 1.16e4
61.10
  • 61.10
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
  • 1.50e4
56.48
  • 56.48
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.37e4
  • 1.37e4
  • 1.84e4
54.26
  • 54.26
  • 38.40
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.91
  • 51.91
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.80e4
  • 1.80e4
39.82
  • 39.82
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.79
  • 37.79
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.72
  • 37.72
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.18
  • 37.18
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.55
  • 36.55
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
35.89
  • 35.89
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.27
  • 33.27
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
32.97
  • 32.97
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.28e4
  • 2.28e4
23.62
  • 23.62
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.43e4
  • 2.43e4
18.57
  • 18.57
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Vertebrata4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000052016.

Cross-references

EnsemblENSDARG00000052016 (cabp2a)
ZFINZDB-GENE-050913-25 (cabp2a)
Uniprot/SPTREMBLQ4V9I3, Q4V9I3_DANRE

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