D. rerio Gene: caspb - ENSDARG00000052039 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000052039
Namecaspb
Descriptioncaspase b [Source:ZFIN;Acc:ZDB-GENE-020812-1]
OrganismDanio rerio (zebrafish)
Synonym(s)caspy2, zgc:109807

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.38e3
  • 1.38e3
95.38
  • 95.38
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
2.56e3
  • 2.56e3
  • 3.24e3
  • 6.18e3
91.43
  • 91.43
  • 89.16
  • 79.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
3.04e3
  • 3.04e3
  • 3.05e3
  • 5.29e3
  • 9.51e3
  • 9.58e3
  • 9.64e3
  • 9.77e3
  • 1.72e4
89.83
  • 89.83
  • 89.78
  • 82.30
  • 68.15
  • 67.93
  • 67.73
  • 67.30
  • 42.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.25e3
  • 3.25e3
  • 5.91e3
89.12
  • 89.12
  • 80.22
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
3.73e3
  • 3.73e3
  • 4.03e3
  • 4.52e3
  • 4.98e3
  • 6.42e3
  • 6.97e3
  • 1.08e4
  • 1.16e4
  • 1.17e4
  • 1.33e4
  • 1.41e4
  • 1.57e4
  • 1.78e4
  • 1.84e4
87.50
  • 87.50
  • 86.50
  • 84.87
  • 83.33
  • 78.50
  • 76.66
  • 63.90
  • 61.10
  • 60.77
  • 55.46
  • 52.87
  • 47.53
  • 40.35
  • 38.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.59e3
  • 4.59e3
84.64
  • 84.64
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
5.51e3
  • 5.51e3
  • 1.64e4
81.55
  • 81.55
  • 44.94
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.13e3
  • 6.13e3
79.46
  • 79.46
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
6.38e3
  • 6.38e3
  • 1.06e4
78.65
  • 78.65
  • 64.66
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.38e3
  • 6.38e3
78.63
  • 78.63
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
6.70e3
  • 6.70e3
  • 1.15e4
  • 1.63e4
77.57
  • 77.57
  • 61.51
  • 45.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.14e4
  • 1.14e4
  • 1.23e4
61.75
  • 61.75
  • 58.80
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.77
  • 57.77
AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
1.36e4
  • 1.36e4
  • 1.40e4
54.53
  • 54.53
  • 53.10
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.70
  • 53.70
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.74
  • 50.74
AEIR
  • AEIR
UBERON:0000165mouth
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.57
  • 47.57
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.79
  • 46.79
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.38
  • 38.38
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.16
  • 38.16
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.63
  • 36.63
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000052039 (caspb)
ZFINZDB-GENE-020812-1 (caspb)
EMBLBC095000, BC164498, BX469930
Uniprot/SPTREMBLQ504J1, Q504J1_DANRE

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