D. rerio Gene: zgc:114041 - ENSDARG00000052109 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000052109
Namezgc:114041
Descriptionzgc:114041 [Source:ZFIN;Acc:ZDB-GENE-050706-122]
OrganismDanio rerio (zebrafish)
Orthologs(s)1 orthologs
Paralog(s)19 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
170
  • 170
99.43
  • 99.43
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
551
  • 551
98.16
  • 98.16
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.45e3
  • 1.45e3
  • 3.58e3
95.16
  • 95.16
  • 88.03
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
2.20e3
  • 2.20e3
  • 9.96e3
  • 1.07e4
  • 1.40e4
  • 1.46e4
92.65
  • 92.65
  • 66.66
  • 64.27
  • 53.03
  • 51.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
4.14e3
  • 4.14e3
  • 5.89e3
86.14
  • 86.14
  • 80.27
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.26e3
  • 4.26e3
85.72
  • 85.72
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.72e3
  • 4.72e3
  • 1.50e4
84.18
  • 84.18
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.52e3
  • 5.52e3
81.52
  • 81.52
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.59e3
  • 6.59e3
77.95
  • 77.95
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.68e3
  • 6.68e3
77.63
  • 77.63
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.87e3
  • 8.87e3
70.29
  • 70.29
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.95e3
  • 8.95e3
70.04
  • 70.04
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.08e3
  • 9.08e3
69.59
  • 69.59
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.40e3
  • 9.40e3
68.54
  • 68.54
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.51e3
  • 9.51e3
  • 1.48e4
68.17
  • 68.17
  • 50.43
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.82
  • 63.82
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.32e4
  • 1.32e4
55.92
  • 55.92
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.04
  • 55.04
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.36
  • 52.36
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.45e4
  • 1.45e4
  • 1.56e4
  • 1.59e4
  • 1.92e4
  • 1.95e4
51.44
  • 51.44
  • 47.88
  • 46.83
  • 35.55
  • 34.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.88
  • 49.88
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.09
  • 49.09
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.62e4
  • 1.62e4
  • 1.97e4
45.92
  • 45.92
  • 34.05
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.67e4
  • 1.67e4
  • 1.76e4
44.21
  • 44.21
  • 40.99
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.71
  • 43.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000052109.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta19 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000052109.

Cross-references

EnsemblENSDARG00000052109 (zgc:114041)
ZFINZDB-GENE-050706-122 (zgc:114041)
EMBLCABZ01049032
Uniprot/SPTREMBLF1QY19, F1QY19_DANRE

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