D. rerio Gene: accs - ENSDARG00000052124 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000052124
Nameaccs
Description1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional) [Source:ZFIN;Acc:ZDB-GENE-050327-39]
OrganismDanio rerio (zebrafish)
Synonym(s)fa10f06, wu:fa10f06, zgc:113217

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.27e3
  • 1.27e3
95.69631
  • 95.69631
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
1.48e3
  • 1.48e3
  • 2.14e3
  • 7.02e3
95.01448
  • 95.01448
  • 92.76248
  • 76.27046
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.32e3
  • 2.32e3
92.15859
  • 92.15859
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.19e3
  • 3.19e3
89.23834
  • 89.23834
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.78e3
  • 4.78e3
83.83408
  • 83.83408
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • UBERON:0000106zygote stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
4.93e3
  • 4.93e3
  • 5.34e3
  • 6.48e3
  • 6.58e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.73e3
  • 6.91e3
  • 6.97e3
  • 7.40e3
  • 7.40e3
  • 7.84e3
  • 8.67e3
  • 8.85e3
  • 8.88e3
  • 8.88e3
  • 8.91e3
  • 9.55e3
  • 9.95e3
  • 1.05e4
  • 1.08e4
  • 1.10e4
  • 1.10e4
  • 1.13e4
  • 1.17e4
  • 1.20e4
  • 1.22e4
83.32826
  • 83.32826
  • 81.95624
  • 78.11654
  • 77.76763
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 77.26767
  • 76.65821
  • 76.46123
  • 74.99322
  • 74.99322
  • 73.51758
  • 70.70917
  • 70.10607
  • 69.98817
  • 69.98817
  • 69.90497
  • 67.72831
  • 66.37981
  • 64.44383
  • 63.62715
  • 62.89663
  • 62.79288
  • 61.66863
  • 60.30875
  • 59.59755
  • 58.90114
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.00e3
  • 6.00e3
79.72048
  • 79.72048
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
7.00e3
  • 7.00e3
  • 7.04e3
  • 8.11e3
  • 9.76e3
  • 1.07e4
76.34546
  • 76.34546
  • 76.20810
  • 72.59189
  • 67.02699
  • 63.74130
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.64e3
  • 7.64e3
74.18755
  • 74.18755
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
7.69e3
  • 7.69e3
  • 8.48e3
  • 8.66e3
  • 8.68e3
  • 8.97e3
  • 9.23e3
  • 9.28e3
  • 9.66e3
  • 1.05e4
  • 1.10e4
74.00166
  • 74.00166
  • 71.35244
  • 70.74615
  • 70.65817
  • 69.66961
  • 68.82362
  • 68.65261
  • 67.34855
  • 64.42073
  • 62.72239
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.93e3
  • 7.93e3
73.19344
  • 73.19344
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.09e3
  • 8.09e3
72.66997
  • 72.66997
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.09e3
  • 8.09e3
72.64418
  • 72.64418
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.17e3
  • 8.17e3
  • 1.03e4
72.37373
  • 72.37373
  • 65.05501
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
8.50e3
  • 8.50e3
  • 8.68e3
  • 1.16e4
71.27104
  • 71.27104
  • 70.66733
  • 60.76953
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.60e3
  • 8.60e3
70.95297
  • 70.95297
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.88e3
  • 8.88e3
69.99645
  • 69.99645
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.07e3
  • 9.07e3
69.35307
  • 69.35307
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
9.32e3
  • 9.32e3
68.48733
  • 68.48733
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.48e3
  • 9.48e3
67.96711
  • 67.96711
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.59e3
  • 9.59e3
67.60527
  • 67.60527
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.81e3
  • 9.81e3
66.86107
  • 66.86107
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.85e3
  • 9.85e3
66.70441
  • 66.70441
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.94e3
  • 9.94e3
66.40022
  • 66.40022
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.01e4
  • 1.01e4
  • 1.10e4
65.73338
  • 65.73338
  • 62.84742
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.46897
  • 64.46897
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.06e4
  • 1.06e4
  • 1.13e4
64.09003
  • 64.09003
  • 61.81299
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.53128
  • 62.53128
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.25e4
  • 1.25e4
  • 1.26e4
  • 1.29e4
57.86605
  • 57.86605
  • 57.42372
  • 56.49164
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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