D. rerio Gene: accs - ENSDARG00000052124 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000052124
Nameaccs
Description1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional) [Source:ZFIN;Acc:ZDB-GENE-050327-39]
OrganismDanio rerio (zebrafish)
Synonym(s)fa10f06, wu:fa10f06, zgc:113217

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.28e3
  • 1.28e3
95.70559
  • 95.70559
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
1.49e3
  • 1.49e3
  • 1.70e3
  • 2.16e3
  • 5.09e3
  • 7.07e3
95.02525
  • 95.02525
  • 94.30225
  • 92.77812
  • 82.95546
  • 76.32177
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.32e3
  • 2.32e3
92.23119
  • 92.23119
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.40e3
  • 2.40e3
91.95781
  • 91.95781
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.19e3
  • 3.19e3
89.33798
  • 89.33798
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.78e3
  • 4.78e3
83.98376
  • 83.98376
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • UBERON:0000106zygote stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
4.98e3
  • 4.98e3
  • 5.38e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.73e3
  • 8.91e3
  • 8.96e3
  • 8.96e3
  • 8.97e3
  • 9.62e3
  • 1.00e4
  • 1.06e4
  • 1.08e4
  • 1.11e4
  • 1.11e4
  • 1.14e4
  • 1.18e4
  • 1.20e4
  • 1.22e4
83.32833
  • 83.32833
  • 81.99518
  • 78.11663
  • 77.76774
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 77.26769
  • 76.65831
  • 76.46134
  • 74.99330
  • 74.99330
  • 73.51770
  • 70.77249
  • 70.17065
  • 69.98828
  • 69.98828
  • 69.97000
  • 67.79804
  • 66.45247
  • 64.52064
  • 63.70582
  • 62.97686
  • 62.87332
  • 61.75153
  • 60.39457
  • 59.68493
  • 58.99002
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.00e3
  • 6.00e3
79.90825
  • 79.90825
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
6.08e3
  • 6.08e3
  • 7.05e3
  • 8.17e3
  • 9.83e3
  • 1.06e4
  • 1.08e4
79.63456
  • 79.63456
  • 76.39661
  • 72.65117
  • 67.09832
  • 64.55102
  • 63.81974
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.34e3
  • 7.34e3
75.41774
  • 75.41774
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
7.54e3
  • 7.54e3
  • 8.54e3
  • 8.72e3
  • 8.74e3
  • 8.99e3
  • 9.23e3
  • 9.29e3
  • 9.73e3
  • 1.06e4
  • 1.10e4
74.76730
  • 74.76730
  • 71.41439
  • 70.80940
  • 70.72163
  • 69.90949
  • 69.11228
  • 68.88829
  • 67.41918
  • 64.49767
  • 63.06754
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.78e3
  • 7.78e3
73.96270
  • 73.96270
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.90e3
  • 7.90e3
73.54877
  • 73.54877
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.99e3
  • 7.99e3
73.25141
  • 73.25141
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.09e3
  • 8.09e3
72.92302
  • 72.92302
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.17e3
  • 8.17e3
  • 1.03e4
72.63055
  • 72.63055
  • 65.37856
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
8.56e3
  • 8.56e3
  • 8.74e3
  • 1.17e4
  • 1.24e4
71.33315
  • 71.33315
  • 70.73077
  • 60.85437
  • 58.47986
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.60e3
  • 8.60e3
71.22191
  • 71.22191
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.64e3
  • 8.64e3
71.08542
  • 71.08542
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.88e3
  • 8.88e3
70.27425
  • 70.27425
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.92e3
  • 8.92e3
  • 1.07e4
70.14751
  • 70.14751
  • 64.09493
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
9.04e3
  • 9.04e3
  • 1.11e4
69.72675
  • 69.72675
  • 62.92777
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.13e3
  • 9.13e3
69.41935
  • 69.41935
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.15e3
  • 9.15e3
69.35164
  • 69.35164
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.65e3
  • 9.65e3
67.67532
  • 67.67532
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.85e3
  • 9.85e3
67.01269
  • 67.01269
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.88e3
  • 9.88e3
66.93276
  • 66.93276
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.94e3
  • 9.94e3
66.71132
  • 66.71132
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.07e4
  • 1.07e4
  • 1.22e4
  • 1.26e4
64.32063
  • 64.32063
  • 59.06198
  • 57.95720
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.07e4
  • 1.07e4
  • 1.14e4
64.16770
  • 64.16770
  • 61.89559
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.87798
  • 62.87798
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.71945
  • 59.71945
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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