D. rerio Gene: pbx4 - ENSDARG00000052150 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000052150
Namepbx4
Descriptionpre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
OrganismDanio rerio (zebrafish)
Synonym(s)fb77e11, lazarus, lzr, pbxa, pbxx, wu:fb77e11

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
603
  • 603
  • 938
  • 1.23e3
  • 1.30e3
  • 1.33e3
  • 1.57e3
  • 2.37e3
  • 2.44e3
  • 5.25e3
  • 8.01e3
97.98
  • 97.98
  • 96.86
  • 95.88
  • 95.63
  • 95.56
  • 94.76
  • 92.08
  • 91.83
  • 82.44
  • 73.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
919
  • 919
96.92
  • 96.92
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
1.03e3
  • 1.03e3
  • 1.04e3
  • 1.49e3
  • 2.23e3
  • 3.49e3
  • 6.75e3
96.54
  • 96.54
  • 96.52
  • 95.00
  • 92.53
  • 88.30
  • 77.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
1.10e3
  • 1.10e3
  • 1.76e3
  • 6.15e3
  • 6.35e3
  • 8.01e3
96.32
  • 96.32
  • 94.10
  • 79.40
  • 78.75
  • 73.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.91e3
  • 1.91e3
  • 7.77e3
  • 8.43e3
93.60
  • 93.60
  • 73.98
  • 71.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.10e3
  • 2.10e3
  • 3.51e3
92.98
  • 92.98
  • 88.26
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.17e3
  • 2.17e3
  • 7.07e3
92.73
  • 92.73
  • 76.33
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000040Larval:Days 14-20
2.41e3
  • 2.41e3
  • 2.65e3
  • 2.79e3
  • 2.99e3
  • 3.68e3
  • 3.85e3
  • 3.97e3
  • 4.83e3
  • 4.86e3
  • 4.98e3
  • 5.50e3
  • 5.81e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.16e3
  • 8.92e3
  • 8.96e3
  • 8.96e3
  • 1.10e4
91.94
  • 91.94
  • 91.14
  • 90.66
  • 89.99
  • 87.69
  • 87.12
  • 86.72
  • 83.84
  • 83.72
  • 83.33
  • 81.60
  • 80.54
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 73.52
  • 72.67
  • 70.12
  • 69.99
  • 69.99
  • 63.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
2.53e3
  • 2.53e3
  • 4.89e3
  • 6.00e3
91.53
  • 91.53
  • 83.61
  • 79.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.98e3
  • 2.98e3
90.02
  • 90.02
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.20e3
  • 3.20e3
89.28
  • 89.28
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
3.27e3
  • 3.27e3
  • 4.73e3
89.05
  • 89.05
  • 84.15
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.49e3
  • 3.49e3
88.30
  • 88.30
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.77e3
  • 3.77e3
87.39
  • 87.39
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.16e3
  • 4.16e3
86.08
  • 86.08
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.50e3
  • 4.50e3
84.93
  • 84.93
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.94e3
  • 4.94e3
83.45
  • 83.45
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.17e3
  • 5.17e3
82.68
  • 82.68
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.53e3
  • 5.53e3
81.48
  • 81.48
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.57e3
  • 5.57e3
81.36
  • 81.36
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.49e3
  • 6.49e3
78.28
  • 78.28
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.69e3
  • 6.69e3
77.59
  • 77.59
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.82e3
  • 7.82e3
73.80
  • 73.80
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.37e3
  • 8.37e3
71.99
  • 71.99
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.79e3
  • 8.79e3
70.57
  • 70.57
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.36e3
  • 9.36e3
  • 1.04e4
68.65
  • 68.65
  • 65.20
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.45e3
  • 9.45e3
68.36
  • 68.36
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.54e3
  • 9.54e3
68.07
  • 68.07
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
9.91e3
  • 9.91e3
66.81
  • 66.81
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.05e4
  • 1.05e4
65.00
  • 65.00
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.10e4
  • 1.10e4
63.19
  • 63.19
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.25e4
  • 1.25e4
58.11
  • 58.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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