D. rerio Gene: zgc:171711 - ENSDARG00000052176 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000052176
Namezgc:171711
Descriptionzgc:171711 [Source:ZFIN;Acc:ZDB-GENE-070928-25]
OrganismDanio rerio (zebrafish)
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.64e3
  • 4.64e3
84.47
  • 84.47
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.22e3
  • 6.22e3
79.19
  • 79.19
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.28e3
  • 7.28e3
75.63
  • 75.63
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.38e3
  • 9.38e3
68.59
  • 68.59
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.52
  • 65.52
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.62
  • 64.62
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.56
  • 64.56
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.26
  • 61.26
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.18
  • 58.18
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.02
  • 58.02
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.89
  • 57.89
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.88
  • 53.88
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.46
  • 44.46
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.82
  • 36.82
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.41
  • 33.41
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.05e4
  • 2.05e4
  • 2.31e4
31.49
  • 31.49
  • 22.50
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
2.24e4
  • 2.24e4
24.96
  • 24.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000052176 (zgc:171711)
ZFINZDB-GENE-070928-25 (zgc:171711)
EMBLBX088711
Uniprot/SPTREMBLF1QZC8, F1QZC8_DANRE

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