D. rerio Gene: zgc:114118 - ENSDARG00000052222 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000052222
Namezgc:114118
Descriptionzgc:114118 [Source:ZFIN;Acc:ZDB-GENE-050913-57]
OrganismDanio rerio (zebrafish)
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000068embryo stage
7.13e3
  • 7.13e3
  • 1.50e4
76.12
  • 76.12
  • 49.80
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
7.31e3
  • 7.31e3
  • 7.66e3
75.51
  • 75.51
  • 74.35
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
9.41e3
  • 9.41e3
  • 1.49e4
68.48
  • 68.48
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
9.73e3
  • 9.73e3
67.42
  • 67.42
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.39e4
  • 1.39e4
53.59
  • 53.59
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
  • 2.03e4
49.85
  • 49.85
  • 31.88
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.84e4
  • 1.84e4
38.24
  • 38.24
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.95e4
  • 1.95e4
  • 2.37e4
34.56
  • 34.56
  • 20.57
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.04e4
  • 2.04e4
  • 2.61e4
31.84
  • 31.84
  • 12.54
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000052222.

Cross-references

EnsemblENSDARG00000052222 (zgc:114118)
ZFINZDB-GENE-050913-57 (zgc:114118)
EMBLBX682552
Uniprot/SPTREMBLF1RAB1, F1RAB1_DANRE

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