D. rerio Gene: alkbh4 - ENSDARG00000052247 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000052247
Namealkbh4
DescriptionalkB homolog 4, lysine demthylase [Source:ZFIN;Acc:ZDB-GENE-060526-275]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-261j4.10

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
501
  • 501
98.33
  • 98.33
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.10e3
  • 2.10e3
92.96
  • 92.96
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.41e3
  • 5.41e3
81.88
  • 81.88
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
5.48e3
  • 5.48e3
  • 6.25e3
81.66
  • 81.66
  • 79.08
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
6.59e3
  • 6.59e3
  • 8.13e3
  • 1.11e4
  • 1.16e4
  • 1.23e4
77.95
  • 77.95
  • 72.76
  • 62.89
  • 61.25
  • 58.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.62e3
  • 6.62e3
77.85
  • 77.85
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.86e3
  • 6.86e3
77.04
  • 77.04
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.88e3
  • 6.88e3
76.95
  • 76.95
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.98e3
  • 6.98e3
76.65
  • 76.65
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
7.13e3
  • 7.13e3
  • 1.03e4
76.12
  • 76.12
  • 65.38
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.15e3
  • 7.15e3
76.05
  • 76.05
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.24e3
  • 7.24e3
75.77
  • 75.77
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.29e3
  • 8.29e3
  • 9.11e3
72.23
  • 72.23
  • 69.50
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.31e3
  • 8.31e3
72.18
  • 72.18
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.48e3
  • 8.48e3
71.62
  • 71.62
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.54e3
  • 8.54e3
  • 1.18e4
71.40
  • 71.40
  • 60.35
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.33e3
  • 9.33e3
68.77
  • 68.77
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.83e3
  • 9.83e3
  • 1.67e4
67.07
  • 67.07
  • 44.23
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.48
  • 64.48
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.47
  • 62.47
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.62
  • 60.62
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.69
  • 58.69
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.37
  • 53.37
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000104life cycle
  • ZFS:0000049segmentation
1.47e4
  • 1.47e4
  • 1.49e4
50.90
  • 50.90
  • 49.95
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.51e4
  • 1.51e4
49.54
  • 49.54
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.27
  • 35.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EnsemblENSDARG00000052247 (alkbh4)
Uniprot/SPTREMBLF1QMZ8, F1QMZ8_DANRE
ZFINZDB-GENE-060526-275 (alkbh4)

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