D. rerio Gene: pak6b - ENSDARG00000052405 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000052405
Namepak6b
Descriptionp21 protein (Cdc42/Rac)-activated kinase 6b [Source:ZFIN;Acc:ZDB-GENE-041014-121]
OrganismDanio rerio (zebrafish)
Synonym(s)pak6, si:ch211-158b22.3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.71e3
  • 2.71e3
90.93
  • 90.93
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.30e3
  • 7.30e3
  • 1.90e4
75.56
  • 75.56
  • 36.45
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.88e3
  • 7.88e3
73.60
  • 73.60
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.35e3
  • 8.35e3
  • 1.20e4
72.06
  • 72.06
  • 59.68
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.01e4
  • 1.01e4
  • 1.05e4
  • 1.08e4
  • 1.23e4
  • 1.62e4
66.34
  • 66.34
  • 64.70
  • 63.84
  • 58.81
  • 45.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.58
  • 65.58
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.25
  • 65.25
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.08
  • 65.08
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.05
  • 58.05
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.86
  • 55.86
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
  • 1.42e4
55.63
  • 55.63
  • 52.55
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.90
  • 44.90
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
42.98
  • 42.98
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.61
  • 40.61
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.81e4
  • 1.81e4
39.35
  • 39.35
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.55
  • 34.55
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
29.03
  • 29.03
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.22e4
  • 2.22e4
25.67
  • 25.67
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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