D. rerio Gene: zgc:110789 - ENSDARG00000052497 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000052497
Namezgc:110789
Descriptionzgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
OrganismDanio rerio (zebrafish)
Synonym(s)im:7144096

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.00e3
  • 4.00e3
86.60
  • 86.60
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
4.60e3
  • 4.60e3
  • 7.03e3
  • 7.12e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.71e3
  • 8.79e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 1.08e4
84.61
  • 84.61
  • 76.46
  • 76.18
  • 74.99
  • 74.99
  • 74.99
  • 73.32
  • 70.82
  • 70.57
  • 69.43
  • 67.48
  • 66.65
  • 63.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.94e3
  • 4.94e3
83.46
  • 83.46
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
8.45e3
  • 8.45e3
  • 1.16e4
71.69
  • 71.69
  • 61.15
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.76e3
  • 8.76e3
70.66
  • 70.66
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.34e3
  • 9.34e3
68.74
  • 68.74
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.39e3
  • 9.39e3
68.57
  • 68.57
AEIR
  • AEIR
CL:0000147pigment cell
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
9.96e3
  • 9.96e3
  • 1.12e4
  • 1.12e4
  • 1.16e4
66.66
  • 66.66
  • 62.49
  • 62.49
  • 61.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
1.02e4
  • 1.02e4
  • 1.18e4
  • 1.74e4
  • 1.83e4
  • 1.94e4
65.84
  • 65.84
  • 60.52
  • 41.86
  • 38.70
  • 35.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001782pigmented layer of retina
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.07e4
  • 1.07e4
  • 1.12e4
64.28
  • 64.28
  • 62.49
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.34
  • 59.34
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.23
  • 59.23
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
  • 1.50e4
57.17
  • 57.17
  • 49.75
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.81
  • 48.81
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.19
  • 47.19
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.59
  • 46.59
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.20
  • 38.20
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.89e4
  • 1.89e4
36.80
  • 36.80
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.26
  • 36.26
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.79
  • 32.79
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.66
  • 32.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLCR847783
EnsemblENSDARG00000052497 (zgc:110789)
Uniprot/SPTREMBLB8JIT8, B8JIT8_DANRE
ZFINZDB-GENE-050306-38 (zgc:110789)

Do not show this banner again