D. rerio Gene: sgms2 - ENSDARG00000052520 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000052520
Namesgms2
Descriptionsphingomyelin synthase 2 [Source:ZFIN;Acc:ZDB-GENE-070730-2]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.59e3
  • 1.59e3
94.67
  • 94.67
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.06e3
  • 5.06e3
83.05
  • 83.05
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.09e3
  • 5.09e3
82.96
  • 82.96
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
8.95e3
  • 8.95e3
  • 1.12e4
  • 1.66e4
70.02
  • 70.02
  • 62.56
  • 44.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.85
  • 61.85
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.00
  • 59.00
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.21
  • 57.21
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.60
  • 54.60
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
1.39e4
  • 1.39e4
  • 1.75e4
53.48
  • 53.48
  • 41.42
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.31
  • 52.31
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.50e4
  • 1.50e4
  • 1.84e4
49.73
  • 49.73
  • 38.34
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.73
  • 47.73
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.64
  • 47.64
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.73
  • 45.73
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.06
  • 44.06
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.71e4
  • 1.71e4
42.86
  • 42.86
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.72e4
  • 1.72e4
  • 1.78e4
  • 1.79e4
  • 1.83e4
42.53
  • 42.53
  • 40.38
  • 40.18
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.75e4
  • 1.75e4
  • 1.85e4
  • 1.87e4
  • 2.02e4
  • 2.02e4
41.31
  • 41.31
  • 37.92
  • 37.31
  • 32.33
  • 32.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.86
  • 40.86
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
  • 1.92e4
37.58
  • 37.58
  • 35.70
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.51
  • 36.51
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.58
  • 34.58
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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